RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 TMEM52Q8NDY8 209 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 OR11G2Q8NGC1 345 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 EPHA6Q9UF33 1036 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 PCDHGA5Q9Y5G8 931 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 XIRP2A4UGR9 3374 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 TSPAN11A1L157 253 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 KCNAB3O43448 404 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 S100A9P06702 114 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 DIO1P49895 249 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 IL13RA1P78552 427 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 HLXQ14774 488 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 OR7A5Q15622 319 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 TMEM17Q86X19 198 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 MUC20Q8N307 709 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 C2CD4CQ8TF44 421 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 KLHL15Q96M94 604 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 ZNF681Q96N22 645 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 ZNF768Q9H5H4 540 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 WDR76Q9H967 626 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 KCNG2Q9UJ96 466 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 CBX7O95931 251 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 CA3P07451 260 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 SLC2A5P22732 501 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 KLHL24Q6TFL4 600 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 OR4S1Q8NGB4 309 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 SCARB1Q8WTV0 552 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 S100A13Q99584 98 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
CSNK1D-202ENST00000314028 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 KRBOX1C9JBD0 128 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 TBX19O60806 448 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 AK1P00568 194 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 THBS1P07996 1170 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 OR3A2P47893 321 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 HHEXQ03014 270 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 C3orf33Q6P1S2 294 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 C15orf40Q8WUR7 153 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 ZBTB8AQ96BR9 441 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 ZNF416Q9BWM5 594 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 CHST6Q9GZX3 395 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 HRH4Q9H3N8 390 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 SLCO1C1Q9NYB5 712 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 MBD2Q9UBB5 411 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 SHPKQ9UHJ6 478 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 ATPIF1Q9UII2 106 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 FBXL21Q9UKT6 434 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 A0A1B0GUH1 482 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 LINC00862A6NCI5 91 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 METTL21EPA6NDL7 271 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 HTR3BO95264 441 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 HLA-DQB1P01920 261 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 CSF1P09603 554 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 HNRNPA1P09651 372 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 BTCP35070 178 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 LIMK1P53667 647 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 PRPS1P60891 318 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 SNRPNP63162 240 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 CHAF1BQ13112 559 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 SLC6A19Q695T7 634 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 GLDNQ6ZMI3 551 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 OVCH1Q7RTY7 1134 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 DCUN1D4Q92564 292 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 PLEKHA1Q9HB21 404 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 KCNE5Q9UJ90 142 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 SLC22A7Q9Y694 548 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 MCRIP1C9JLW8 97 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 MTRF1O75570 445 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 PI3P19957 117 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 TACR3P29371 465 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 OR1D4P47884 311 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 NANOS3P60323 173 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 KLF9Q13886 244 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 PXT1Q8NFP0 134 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 RSC1A1Q92681 617 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 PARP12Q9H0J9 701 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
CSNK1D-202ENST00000314028 C17orf105B2RV13 164 aa13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 TMEM150CB9EJG8 249 aa13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 H3BML4 177 aa13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 TIMP1P01033 207 aa13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 CTRB1P17538 263 aa13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 ACTBP60709 375 aa13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 RPS15P62841 145 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-202ENST00000314028 ACTG1P63261 375 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms