RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DNASE1L3Q13609 305 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 ACSM3Q53FZ2 586 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 ZNF468Q5VIY5 522 aaPredicted RBP19.1■□□□□ 0.65
ATG4D-201ENST00000309469 KCTD20Q7Z5Y7 419 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 LAX1Q8IWV1 398 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 OR6N2Q8NGY6 317 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 KLHL15Q96M94 604 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 C5orf34Q96MH7 638 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 RHBDL2Q9NX52 303 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 P4HTMQ9NXG6 502 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 TRBV2A0A0J9YWF9 115 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 NPIPB13A6NJU9 1138 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 NPIPB4C9JG80 1138 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 NPIPA5E9PKD4 350 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 PSMD9O00233 223 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 NCR1O76036 304 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 IFNGR1P15260 489 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 TGM1P22735 817 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 DAP3P51398 398 aaKnown RBP19.1■□□□□ 0.65
ATG4D-201ENST00000309469 H3F3CQ6NXT2 135 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 PXKQ7Z7A4 578 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 EGFL6Q8IUX8 553 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 ASB10Q8WXI3 467 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 TMEM185BQ9H7F4 350 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 ABCB9Q9NP78 766 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 FANCFQ9NPI8 374 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 LAMP5Q9UJQ1 280 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 NPIPA1Q9UND3 350 aa19.1■□□□□ 0.65
ATG4D-201ENST00000309469 RALGAPA1Q6GYQ0 2036 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 WDFY3Q8IZQ1 3526 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 IGLV1-36A0A0B4J1U3 117 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SNPHO15079 494 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SERPINA3P01011 423 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 OPN1LWP04000 364 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SERPINA7P05543 415 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 TACSTD2P09758 323 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 FKBP2P26885 142 aaKnown RBP19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SHC1P29353 583 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 CENPAP49450 140 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 BLVRAP53004 296 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 HSF1Q00613 529 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 C19orf57Q0VDD7 668 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SELENBP1Q13228 472 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 TRIP6Q15654 476 aaKnown RBP19.09■□□□□ 0.65
ATG4D-201ENST00000309469 DPY19L4Q7Z388 723 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 FAM83FQ8NEG4 500 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SLC25A43Q8WUT9 341 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-201ENST00000309469 PPP1R14BQ96C90 147 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 SGCZQ96LD1 299 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 GPR87Q9BY21 358 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 MIXL1Q9H2W2 232 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 TMEM14AQ9Y6G1 99 aa19.09■□□□□ 0.65
ATG4D-201ENST00000309469 CPAMD8Q8IZJ3 1885 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 LIFP15018 202 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 CTLA4P16410 223 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 ALOX5APP20292 161 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 DLSTP36957 453 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 CSRP2Q16527 193 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 FAM27D1Q5T7N8 215 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 STEAP3Q658P3 488 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 SLC35D2Q76EJ3 337 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 SLC22A16Q86VW1 577 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 OR13C5Q8NGS8 318 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 GNRHR2Q96P88 292 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 OR5B2Q96R09 309 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 RNF32Q9H0A6 362 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 TSPAN10Q9H1Z9 355 aaPredicted RBP19.08■□□□□ 0.65
ATG4D-201ENST00000309469 POLE4Q9NR33 117 aa19.08■□□□□ 0.65
ATG4D-201ENST00000309469 MRM2Q9UI43 246 aaKnown RBP19.08■□□□□ 0.65
ATG4D-201ENST00000309469 C21orf140B9A014 251 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 G3V3Y1 287 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 HLA-DQA2P01906 255 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 OR8G3PP0DMU2 310 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 DPP4P27487 766 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 CRABP1P29762 137 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 POU3F1Q03052 451 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-201ENST00000309469 DDI2Q5TDH0 399 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 B3GNTL1Q67FW5 361 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-201ENST00000309469 FAM220AQ7Z4H9 259 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 MDGA2Q7Z553 956 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 GTPBP8Q8N3Z3 284 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-201ENST00000309469 TEX19Q8NA77 164 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 OR1J4Q8NGS1 313 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 RPS4Y2Q8TD47 263 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 RNF166Q96A37 237 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-201ENST00000309469 UBL7Q96S82 380 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-201ENST00000309469 ATF6BQ99941 703 aa19.08■□□□□ 0.64
ATG4D-201ENST00000309469 A0A1W2PNR3 127 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 A0A1W2PNV4 684 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 FUOMA2VDF0 154 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 TERTO14746 1132 aaKnown RBP19.07■□□□□ 0.64
ATG4D-201ENST00000309469 SNX4O95219 450 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 KRT8P05787 483 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 DSCR4P56555 118 aaPredicted RBP19.07■□□□□ 0.64
ATG4D-201ENST00000309469 OR2B6P58173 313 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 ETFDHQ16134 617 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 FAM205BPQ63HN1 556 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 PAMR1Q6UXH9 720 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 PIP4P1Q86T03 277 aa19.07■□□□□ 0.64
ATG4D-201ENST00000309469 ADPRHL1Q8NDY3 354 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms