RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DPY19L4Q7Z388 723 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 MFSD9Q8NBP5 474 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 OR4C3Q8NH37 302 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 SLC22A18Q96BI1 424 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM41AQ96HV5 264 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 KCNK15Q9H427 330 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 GRHPRQ9UBQ7 328 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ELF5Q9UKW6 265 aaPredicted RBP11.59□□□□□ -0.55
RETREG3-201ENST00000309428 DOCK7Q96N67 2140 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 CPED1A4D0V7 1026 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 C2orf74A8MZ97 194 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 PRAF2O60831 178 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 NRG3P56975 720 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 FAM53BQ14153 422 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 GLRX5Q86SX6 157 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 LRRTM1Q86UE6 522 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 TPRA1Q86W33 373 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ACBD4Q8NC06 268 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 MORN4Q8NDC4 146 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 C5orf34Q96MH7 638 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF285Q96NJ3 590 aa11.59□□□□□ -0.55
RETREG3-201ENST00000309428 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.59□□□□□ -0.55
RETREG3-201ENST00000309428 SLC33A1O00400 549 aaPredicted RBP11.58□□□□□ -0.55
RETREG3-201ENST00000309428 APBB3O95704 486 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF616Q08AN1 781 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF584Q8IVC4 421 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 SCARB1Q8WTV0 552 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 KLHDC7BQ96G42 594 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 TIMM29Q9BSF4 260 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 C20orf24Q9BUV8 137 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 PRTFDC1Q9NRG1 225 aa11.58□□□□□ -0.55
RETREG3-201ENST00000309428 POLEQ07864 2286 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 A0A087WV48 116 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 KCNAB3O43448 404 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 NAT2P11245 290 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 ACTA2P62736 377 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 ACTG2P63267 376 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 TRAM1Q15629 374 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 RNASE10Q5GAN6 216 aaKnown RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 B3GNTL1Q67FW5 361 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 ARHGAP11AQ6P4F7 1023 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 OR6V1Q8N148 313 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 WDR34Q96EX3 536 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 DPYSL5Q9BPU6 564 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 ZFP64Q9NPA5 681 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 NRIP3Q9NQ35 241 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 PCDHGA9Q9Y5G4 932 aaKnown RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 MTCL1Q9Y4B5 1905 aaKnown RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 MEIKINA0A087WXM9 373 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 A0A1W2PQF6 199 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 D6RAR5 112 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 NDUFB2O95178 105 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 KIR2DL1P43626 348 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 PLA1AQ53H76 456 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 IGSF11Q5DX21 431 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 TSTD1Q8NFU3 115 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 NANPQ8TBE9 248 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 Q96M85 177 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 PRMT8Q9NR22 394 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-201ENST00000309428 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 SPTA1P02549 2419 aa11.58□□□□□ -0.56
RETREG3-201ENST00000309428 HIST1H1CP16403 213 aaKnown RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 OR3A2P47893 321 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 OR7E24Q6IFN5 339 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 H3F3CQ6NXT2 135 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 STPG2Q8N412 459 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 NIT2Q9NQR4 276 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 TESQ9UGI8 421 aaKnown RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 GPR160Q9UJ42 338 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 HEBP2Q9Y5Z4 205 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 HEATR5AQ86XA9 2040 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 GPR75O95800 540 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 THY1P04216 161 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 ZP2Q05996 745 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 HLXQ14774 488 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 TMEM201Q5SNT2 666 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 RNF165Q6ZSG1 346 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 MCATQ8IVS2 390 aaKnown RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 GLB1L2Q8IW92 636 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 METTL21AQ8WXB1 218 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 DIO2Q92813 273 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 MENTQ9BUN1 341 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 BCL2L14Q9BZR8 327 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 NKX6-2Q9C056 277 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 GHITMQ9H3K2 345 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 CGGBP1Q9UFW8 167 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-201ENST00000309428 CYB5R1Q9UHQ9 305 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 SLC17A4Q9Y2C5 497 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 ICE1Q9Y2F5 2266 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 ROS1P08922 2347 aa11.57□□□□□ -0.56
RETREG3-201ENST00000309428 GPR31O00270 319 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms