RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 CPN1P15169 458 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 UBE2IP63279 158 aaKnown RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 MAT1AQ00266 395 aaKnown RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 ZNHIT3Q15649 155 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 PRAMEF17Q5VTA0 474 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 OVCH2Q7RTZ1 564 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 SLC35F3Q8IY50 421 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 C14orf105Q9NVL8 296 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 EMC3Q9P0I2 261 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 GLS2Q9UI32 602 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 SLC27A6Q9Y2P4 619 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 PLXNA2O75051 1894 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 A0A0B4J2E0 115 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 A0A1B0GX12 115 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 A0A1W2PQU0 124 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 CTDSPLO15194 276 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 RAB3AP20336 220 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 GRK6P43250 576 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 BAMBIQ13145 260 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 OR7A5Q15622 319 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM240Q5SV17 173 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 PDSS1Q5T2R2 415 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 SYS1Q8N2H4 156 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 ZNF764Q96H86 408 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 RNF215Q9Y6U7 377 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 ARHGEF17Q96PE2 2063 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 FITM1A5D6W6 292 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 H0Y8X5 98 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 B3GALNT1O75752 331 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 RAB3DO95716 219 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 FGF2P09038 288 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 TACSTD2P09758 323 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 ENPP2Q13822 863 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 ELFN2Q5R3F8 820 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 JAGN1Q8N5M9 183 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 PATE1Q8WXA2 126 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 COLEC10Q9Y6Z7 277 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 HEATR5AQ86XA9 2040 aa13.12□□□□□ -0.31
SCUBE2-201ENST00000309263 HRKO00198 91 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 GPRIN2O60269 458 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 LILRB3O75022 631 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 NUDT14O95848 222 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 PBX2P40425 430 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 STEAP1BQ6NZ63 245 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 CHST4Q8NCG5 386 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 OR14A16Q8NHC5 309 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 RBM18Q96H35 190 aaKnown RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 VRK1Q99986 396 aaPredicted RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TINAGL1Q9GZM7 467 aaPredicted RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 SNRPGP15A8MWD9 76 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 FADS1O60427 444 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 AKAIN1P0CW23 69 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 CDKN2AP42771 156 aaKnown RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 ZCCHC12Q6PEW1 402 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 SPACA7Q96KW9 195 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TREM1Q9NP99 234 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 ACTR10Q9NZ32 417 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM272A0A1B0GTI8 110 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 ZNF705EA8MWA4 302 aaPredicted RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 DCTN6O00399 190 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 RDH16O75452 317 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 GLSO94925 669 aaPredicted RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 OR2A4O95047 310 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 PVALBP20472 110 aaPredicted RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 CST6Q15828 149 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TMEM205Q6UW68 189 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 LINC00518Q8N0U6 118 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 OR4S1Q8NGB4 309 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 OR1J2Q8NGS2 313 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 OR2A7Q96R45 310 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 C12orf57Q99622 126 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 CMKLR1Q99788 373 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 TRIM2Q9C040 744 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 WDR76Q9H967 626 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 CHRNA9Q9UGM1 479 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
SCUBE2-201ENST00000309263 OR14I1A6ND48 311 aa13.1□□□□□ -0.31
SCUBE2-201ENST00000309263 DCNP07585 359 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms