RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 IGFBP2P18065 325 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 MPGP29372 298 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 PCYT1AP49585 367 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 RPL13AP3Q6NVV1 102 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 DPY19L2P2Q6ZN68 376 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 BHLHA15Q7RTS1 189 aaPredicted RBP19.67■□□□□ 0.74
HOXD4-201ENST00000306324 HIPK1Q86Z02 1210 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ZDHHC13Q8IUH4 622 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 DMRTC2Q8IXT2 367 aaPredicted RBP19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF433Q8N7K0 673 aaPredicted RBP19.67■□□□□ 0.74
HOXD4-201ENST00000306324 SYT14Q8NB59 555 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 OR52L1Q8NGH7 329 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 LINC01560Q8TB33 94 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 Q96M85 177 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF570Q96NI8 536 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 GPX7Q96SL4 187 aaPredicted RBP19.67■□□□□ 0.74
HOXD4-201ENST00000306324 IFT27Q9BW83 186 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 CRLF2Q9HC73 371 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 NRIP3Q9NQ35 241 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 IER3IP1Q9Y5U9 82 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 PDLIM1O00151 329 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 TRMUO75648 421 aaKnown RBP19.67■□□□□ 0.74
HOXD4-201ENST00000306324 RAD51DO75771 328 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 PEX19P40855 299 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 RPS6KA3P51812 740 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 CLEC12AQ5QGZ9 265 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 NOXO1Q8NFA2 376 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 STEAP2Q8NFT2 490 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ULBP2Q9BZM5 246 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 ACTR6Q9GZN1 396 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 GPR35Q9HC97 309 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 GLTPQ9NZD2 209 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 NDRG3Q9UGV2 375 aa19.67■□□□□ 0.74
HOXD4-201ENST00000306324 TEX13CA0A0J9YWL9 993 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 A6NIZ1 184 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 SAC3D1A6NKF1 404 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 IGFBP1P08833 259 aaPredicted RBP19.66■□□□□ 0.74
HOXD4-201ENST00000306324 KIR2DL3P43628 341 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 RAP1BP61224 184 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 RAP1AP62834 184 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 MYBPC1Q00872 1141 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 TGFBR3Q03167 851 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 COX10Q12887 443 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 FAM205BPQ63HN1 556 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 KLHL17Q6TDP4 642 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 CD300LDQ6UXZ3 194 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 FAM122BQ7Z309 247 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 SVOPLQ8N434 492 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 ARIH2OSQ8N7S6 290 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF519Q8TB69 540 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 HDAC2Q92769 488 aaKnown RBP19.66■□□□□ 0.74
HOXD4-201ENST00000306324 TMEM54Q969K7 222 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 S100PBPQ96BU1 408 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 RASD2Q96D21 266 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 ERMAPQ96PL5 475 aaPredicted RBP19.66■□□□□ 0.74
HOXD4-201ENST00000306324 MED18Q9BUE0 208 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 PLA2G12AQ9BZM1 189 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 TBC1D23Q9NUY8 699 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 IL20Q9NYY1 176 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 OAZ3Q9UMX2 235 aa19.66■□□□□ 0.74
HOXD4-201ENST00000306324 CENPEQ02224 2701 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 XKRYO14609 159 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 ARHGEF9O43307 516 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 BAG2O95816 211 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 COX6B1P14854 86 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 SDHAP31040 664 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 CD47Q08722 323 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 STK11Q15831 433 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 CEACAM16Q2WEN9 425 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 HIST2H2BCQ6DN03 193 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 MAGEE2Q8TD90 523 aaPredicted RBP19.65■□□□□ 0.74
HOXD4-201ENST00000306324 ZNF837Q96EG3 531 aaPredicted RBP19.65■□□□□ 0.74
HOXD4-201ENST00000306324 ZC3HAV1LQ96H79 300 aaKnown RBP19.65■□□□□ 0.74
HOXD4-201ENST00000306324 SPOCK3Q9BQ16 436 aa19.65■□□□□ 0.74
HOXD4-201ENST00000306324 MRPL13Q9BYD1 178 aaKnown RBP19.65■□□□□ 0.74
HOXD4-201ENST00000306324 SH3D21A4FU49 640 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 H3BN98 237 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 RPL36A-HNRNPH2H7BZ11 118 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 SOCS2O14508 198 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 NOS3P29474 1203 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 KRR1Q13601 381 aaKnown RBP19.64■□□□□ 0.73
HOXD4-201ENST00000306324 SLC36A3Q495N2 470 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 MESTQ5EB52 335 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 GPR139Q6DWJ6 353 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 ZNF771Q7L3S4 317 aaPredicted RBP19.64■□□□□ 0.73
HOXD4-201ENST00000306324 CLDN22Q8N7P3 220 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 ACBD4Q8NC06 268 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 OR8D4Q8NGM9 314 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 WFIKKN1Q96NZ8 548 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 KCNK17Q96T54 332 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 TSSK6Q9BXA6 273 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 CRIM1Q9NZV1 1036 aa19.64■□□□□ 0.73
HOXD4-201ENST00000306324 CENPBD1B2RD01 187 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 H7C1C5 153 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 TP53P04637 393 aaPredicted RBP19.63■□□□□ 0.73
HOXD4-201ENST00000306324 QDPRP09417 244 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 DAPP51397 102 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 LCN6P62502 163 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 GABRA6Q16445 453 aa19.63■□□□□ 0.73
HOXD4-201ENST00000306324 OR7E24Q6IFN5 339 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms