RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 OR2B6P58173 313 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 SIRPAP78324 504 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 SLC35D2Q76EJ3 337 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 PXKQ7Z7A4 578 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 ABHD4Q8TB40 342 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 SLC25A43Q8WUT9 341 aaPredicted RBP19.99■□□□□ 0.79
SMAD1-201ENST00000302085 NKD1Q969G9 470 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 FAM117AQ9C073 453 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 EP300Q09472 2414 aaPredicted RBP19.99■□□□□ 0.79
SMAD1-201ENST00000302085 NPIPA5E9PKD4 350 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 CTLA4P16410 223 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 S100A5P33763 92 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 SFTPDP35247 375 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 DNASE1L1P49184 302 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 P2RY4P51582 365 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 ETFDHQ16134 617 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 MRPL48Q96GC5 212 aaKnown RBP19.99■□□□□ 0.79
SMAD1-201ENST00000302085 ACOXLQ9NUZ1 547 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 B3GAT1Q9P2W7 334 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 PLEKHB1Q9UF11 243 aaPredicted RBP19.99■□□□□ 0.79
SMAD1-201ENST00000302085 NPIPA1Q9UND3 350 aa19.99■□□□□ 0.79
SMAD1-201ENST00000302085 A6NIZ1 184 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 NPIPB13A6NJU9 1138 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 NPIPB4C9JG80 1138 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 PSMD9O00233 223 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 CBR3O75828 277 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 P04436 131 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 FKBP2P26885 142 aaKnown RBP19.98■□□□□ 0.79
SMAD1-201ENST00000302085 RAP1BP61224 184 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 RAP1AP62834 184 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 POU3F1Q03052 451 aaPredicted RBP19.98■□□□□ 0.79
SMAD1-201ENST00000302085 HNRNPA0Q13151 305 aaKnown RBP19.98■□□□□ 0.79
SMAD1-201ENST00000302085 GHSRQ92847 366 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 RNF166Q96A37 237 aaPredicted RBP19.98■□□□□ 0.79
SMAD1-201ENST00000302085 FOXN4Q96NZ1 517 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 INTS14Q96SY0 518 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 TSPAN10Q9H1Z9 355 aaPredicted RBP19.98■□□□□ 0.79
SMAD1-201ENST00000302085 MED29Q9NX70 200 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 STMN3Q9NZ72 180 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 CRNNQ9UBG3 495 aaPredicted RBP19.98■□□□□ 0.79
SMAD1-201ENST00000302085 POLHQ9Y253 713 aa19.98■□□□□ 0.79
SMAD1-201ENST00000302085 SMIM30A4D0T7 59 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 PSKH1P11801 424 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 PSMB10P40306 273 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 DAP3P51398 398 aaKnown RBP19.97■□□□□ 0.79
SMAD1-201ENST00000302085 CDK5R1Q15078 307 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 ADPRHL1Q8NDY3 354 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 OR6N2Q8NGY6 317 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 NEIL3Q8TAT5 605 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 DOCK10Q96BY6 2186 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 KLHL15Q96M94 604 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 PPIL3Q9H2H8 161 aaKnown RBP19.97■□□□□ 0.79
SMAD1-201ENST00000302085 SMURF1Q9HCE7 757 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 SACM1LQ9NTJ5 587 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 B3GNT3Q9Y2A9 372 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 HDGFL3Q9Y3E1 203 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 A0A1W2PNV4 684 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 ZNF814B7Z6K7 855 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 ALOX5APP20292 161 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 TRAM1Q15629 374 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 OTPQ5XKR4 325 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 JMJD6Q6NYC1 403 aaPredicted RBP19.97■□□□□ 0.79
SMAD1-201ENST00000302085 RPL22L1Q6P5R6 122 aaKnown RBP19.97■□□□□ 0.79
SMAD1-201ENST00000302085 MRM2Q9UI43 246 aaKnown RBP19.97■□□□□ 0.79
SMAD1-201ENST00000302085 DKKL1Q9UK85 242 aa19.97■□□□□ 0.79
SMAD1-201ENST00000302085 CASKO14936 926 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 RPS27P42677 84 aaKnown RBP19.96■□□□□ 0.79
SMAD1-201ENST00000302085 CYB561P49447 251 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 CENPAP49450 140 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 CAV3P56539 151 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 GABREP78334 506 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 DCAF10Q5QP82 559 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 PLEKHG7Q6ZR37 379 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 DPY19L4Q7Z388 723 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 KCNK17Q96T54 332 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 MRPL22Q9NWU5 206 aaKnown RBP19.96■□□□□ 0.79
SMAD1-201ENST00000302085 TRAPPC4Q9Y296 219 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 MED12Q93074 2177 aa19.96■□□□□ 0.79
SMAD1-201ENST00000302085 IQCMA0A1B0GVH7 501 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 OR2M5A3KFT3 312 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 TAF4O00268 1085 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 SC5DO75845 299 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 CCDC58Q4VC31 144 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 TUBA3EQ6PEY2 450 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 TMPPEQ6ZT21 453 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 MIB2Q96AX9 1013 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 SMIM19Q96E16 107 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 MNTQ99583 582 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 LAMP5Q9UJQ1 280 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 ING1Q9UK53 422 aaPredicted RBP19.95■□□□□ 0.78
SMAD1-201ENST00000302085 ZNF593O00488 134 aaPredicted RBP19.95■□□□□ 0.78
SMAD1-201ENST00000302085 F10P00742 488 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 HLA-DQA2P01906 255 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 CD1AP06126 327 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 KLK2P20151 261 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 EDNRAP25101 427 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 GDI2P50395 445 aaKnown RBP19.95■□□□□ 0.78
SMAD1-201ENST00000302085 PPP5CP53041 499 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 IFITM3Q01628 133 aa19.95■□□□□ 0.78
SMAD1-201ENST00000302085 ZNF239Q16600 458 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms