RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 OR8G2PQ6IF36 304 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 LANCL3Q6ZV70 420 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 OR10D4PQ8NGN7 298 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
SCN3B-201ENST00000299333 TREX1Q9NSU2 369 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 SLC35D1Q9NTN3 355 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 OR52A4PA6NMU1 304 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 PLPP7Q8NBV4 271 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 RARRES3Q9UL19 164 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 TMEM200CA6NKL6 621 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 SLC16A6O15403 523 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 LY86O95711 162 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 NAGAP17050 411 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 KLHDC8BQ8IXV7 354 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 LMNTD1Q8N9Z9 388 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 CLEC1AQ8NC01 280 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 BPIFCQ8NFQ6 507 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 SLC25A46Q96AG3 418 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 NMNAT3Q96T66 252 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 GPR62Q9BZJ7 368 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 OBP2BQ9NPH6 170 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 PLSCR3Q9NRY6 295 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 CBLCQ9ULV8 474 aa13.76□□□□□ -0.21
SCN3B-201ENST00000299333 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
SCN3B-201ENST00000299333 SRMP19623 302 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF90Q03938 601 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 GLYATL3Q5SZD4 288 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 S100A7AQ86SG5 101 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 COMMD1Q8N668 190 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 ULBP3Q9BZM4 244 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 STRADBQ9C0K7 418 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 OR52A1Q9UKL2 312 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 A3GALT2U3KPV4 340 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 TERTO14746 1132 aaKnown RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 TCF21O43680 179 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 PTBP1P26599 531 aaKnown RBP eCLIP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 KCNJ10P78508 379 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 YOD1Q5VVQ6 348 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 MRPL10Q7Z7H8 261 aaKnown RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 IL22RA1Q8N6P7 574 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 FTSJ1Q9UET6 329 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 NXT1Q9UKK6 140 aaKnown RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 TRAV34A0A0B4J273 112 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 LOC100289279A0A1B0GTE1 492 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 P2RY10O00398 339 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 HSD17B6O14756 317 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 HTR1FP30939 366 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 PPP2CAP67775 309 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 APH1BQ8WW43 257 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF845Q96IR2 970 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 ZCCHC4Q9H5U6 513 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 OR2F2O95006 317 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 QDPRP09417 244 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 OR2F1Q13607 317 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 CLEC12BQ2HXU8 276 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 C9orf152Q5JTZ5 239 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 Q6ZRG5 221 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 SLC38A5Q8WUX1 472 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 UBL7Q96S82 380 aaPredicted RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 ESRP2Q9H6T0 727 aaKnown RBP13.75□□□□□ -0.21
SCN3B-201ENST00000299333 CHRNA9Q9UGM1 479 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 DLG5Q8TDM6 1919 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 LGI1O95970 557 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 LPCAT3Q6P1A2 487 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 TMEM71Q6P5X7 295 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 OPN5Q6U736 354 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 NPSR1Q6W5P4 371 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 LRRTM1Q86UE6 522 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 LSMEM2Q8N112 164 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF680Q8NEM1 530 aa13.75□□□□□ -0.21
SCN3B-201ENST00000299333 AKAP12Q02952 1782 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 A6NCN8 305 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 M0R143 59 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 HOXC11O43248 304 aaPredicted RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 DDAH2O95865 285 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 UBE2MP61081 183 aaKnown RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 DHRS11Q6UWP2 260 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 IGSF21Q96ID5 467 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 PCYT2Q99447 389 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ACSS1Q9NUB1 689 aaPredicted RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 EMC9Q9Y3B6 208 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 TGM5O43548 720 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 RAD52P43351 418 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 SNRPEP62304 92 aaKnown RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CST6Q15828 149 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 FOXB2Q5VYV0 432 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 MBOAT2Q6ZWT7 520 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CPXM2Q8N436 756 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 OR4N2Q8NGD1 307 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 GPR119Q8TDV5 335 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 GPR55Q9Y2T6 319 aaPredicted RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 RAB27BO00194 218 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 TACR1P25103 407 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ELAVL4P26378 380 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms