RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 IRF3Q14653 427 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 NADK2Q4G0N4 442 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 XAF1Q6GPH4 301 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 KCTD8Q6ZWB6 473 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 PM20D2Q8IYS1 436 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 ZIC4Q8N9L1 334 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 PNPLA2Q96AD5 504 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 TMEM80Q96HE8 168 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 EMC6Q9BV81 110 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 CCDC90BQ9GZT6 254 aa21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 ZNF71Q9NQZ8 489 aaPredicted RBP21.94■■□□□ 1.1
GTF2A1-201ENST00000298173 BSNQ9UPA5 3926 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 IRGMA1A4Y4 181 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 RPL5P46777 297 aaKnown RBP21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 PON3Q15166 354 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 EEF1A1P5Q5VTE0 462 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 RNLSQ5VYX0 342 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 ZBTB46Q86UZ6 589 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 C9orf43Q8TAL5 461 aaPredicted RBP21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 CRELD1Q96HD1 420 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 NUAK2Q9H093 628 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 SRA1Q9HD15 236 aaKnown RBP21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 MOKQ9UQ07 419 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 SNX5Q9Y5X3 404 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 FKBP7Q9Y680 259 aa21.93■■□□□ 1.1
GTF2A1-201ENST00000298173 ATMQ13315 3056 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 SLC35F4A4IF30 521 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 JUNBP17275 347 aaPredicted RBP21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 DCKP27707 260 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 ALDH3B2P48448 385 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 SLC16A1P53985 500 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 LGALS3BPQ08380 585 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 GTF2IRD2BQ6EKJ0 949 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 FCRLAQ7L513 359 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 GTF2IRD2Q86UP8 949 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 OR51L1Q8NGJ5 315 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 OR2T4Q8NH00 348 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 SLC25A44Q96H78 314 aaPredicted RBP21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 ADAD1Q96M93 576 aaKnown RBP21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 PRDM14Q9GZV8 571 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 PRORYQ9H606 182 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 ING1Q9UK53 422 aaPredicted RBP21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 DIMT1Q9UNQ2 313 aaKnown RBP21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 B9D1Q9UPM9 204 aa21.92■■□□□ 1.1
GTF2A1-201ENST00000298173 GLCEO94923 617 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 CRYABP02511 175 aaKnown RBP21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 RPS7P62081 194 aaKnown RBP21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 GGTLC2Q14390 218 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 C3AR1Q16581 482 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 Q8NA96 180 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 OR4F15Q8NGB8 312 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 ZNF385AQ96PM9 386 aaKnown RBP21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 COMMD3-BMI1R4GMX3 469 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 FADS2O95864 444 aaKnown RBP21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 HDDC2Q7Z4H3 204 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 NMD3Q96D46 503 aaKnown RBP21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 ALG12Q9BV10 488 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 ADGRL4Q9HBW9 690 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 ACOT13Q9NPJ3 140 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 FLVCR1Q9Y5Y0 555 aa21.91■■□□□ 1.1
GTF2A1-201ENST00000298173 NPIPA2E9PIF3 369 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 NPIPA3F8WFD2 350 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 ZNF432O94892 652 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 APOL3O95236 402 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 PGA4P0DJD7 388 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 PGA3P0DJD8 388 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 PYCR1P32322 319 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 MAP2K4P45985 399 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 CLDN17P56750 224 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 HIST3H3Q16695 136 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 SYT14Q8NB59 555 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 OR51G2Q8NGK0 314 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 RNF128Q8TEB7 428 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 ARHGAP9Q9BRR9 750 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 ZNF649Q9BS31 505 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 JAM3Q9BX67 310 aa21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 SPENQ96T58 3664 aaKnown RBP21.9■■□□□ 1.1
GTF2A1-201ENST00000298173 IGKV3D-15A0A087WSY6 115 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 IGLV1-36A0A0B4J1U3 117 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 CENPBD1B2RD01 187 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 RAB36O95755 333 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 IGHA1P01876 353 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 SBK2P0C263 348 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 CTLA4P16410 223 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 CAMK2DQ13557 499 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 LCN1P1Q5VSP4 162 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 ZNF324BQ6AW86 544 aaPredicted RBP21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 SHFQ7M4L6 423 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 SVOPQ8N4V2 548 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 FAR1Q8WVX9 515 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 ZMYND19Q96E35 227 aaPredicted RBP21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 TUBA1CQ9BQE3 449 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 BATF3Q9NR55 127 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 LUZP4Q9P127 313 aa21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 MCTS1Q9ULC4 181 aaKnown RBP21.89■■□□□ 1.1
GTF2A1-201ENST00000298173 BOD1L1Q8NFC6 3051 aa21.88■■□□□ 1.09
GTF2A1-201ENST00000298173 ZNF726A6NNF4 738 aa21.88■■□□□ 1.09
GTF2A1-201ENST00000298173 SLC16A7O60669 478 aa21.88■■□□□ 1.09
GTF2A1-201ENST00000298173 IGHG1P01857 330 aa21.88■■□□□ 1.09
GTF2A1-201ENST00000298173 CRABP1P29762 137 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms