RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SQSTM1Q13501 440 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 ZSWIM7Q19AV6 140 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 TEX19Q8NA77 164 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 OR5M1Q8NGP8 315 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 KCTD12Q96CX2 325 aaKnown RBP10.63□□□□□ -0.71
RHO-201ENST00000296271 TMEM246Q9BRR3 403 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 PRO3102Q9H379 93 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 LIN7BQ9HAP6 207 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 MRPL22Q9NWU5 206 aaKnown RBP10.63□□□□□ -0.71
RHO-201ENST00000296271 NPFFR2Q9Y5X5 522 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 CACNG2Q9Y698 323 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 U3KQA8 63 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 RALGAPA1Q6GYQ0 2036 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 MASP2O00187 686 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 ARL6IP5O75915 188 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 GP1BBP13224 206 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 ALOX5APP20292 161 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 EEF1A1P5Q5VTE0 462 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 HAVCR2Q8TDQ0 301 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 METTL21AQ8WXB1 218 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 MVB12AQ96EY5 273 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 KLK11Q9UBX7 282 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 FLVCR2Q9UPI3 526 aa10.63□□□□□ -0.71
RHO-201ENST00000296271 PHF3Q92576 2039 aaKnown RBP10.62□□□□□ -0.71
RHO-201ENST00000296271 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 TMEM200CA6NKL6 621 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 IFITM5A6NNB3 132 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 ZNF593O00488 134 aaPredicted RBP10.62□□□□□ -0.71
RHO-201ENST00000296271 SLC25A12O75746 678 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SERPINA3P01011 423 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 KIR3DL2P43630 455 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SLC25A1P53007 311 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 GPLD1P80108 840 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SNTA1Q13424 505 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 ALKBH1Q13686 389 aaKnown RBP10.62□□□□□ -0.71
RHO-201ENST00000296271 ISXQ2M1V0 245 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 C6orf183Q5T699 404 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SFRP4Q6FHJ7 346 aaPredicted RBP10.62□□□□□ -0.71
RHO-201ENST00000296271 STAC2Q6ZMT1 411 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 OR5AK2Q8NH90 309 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 ZCCHC4Q9H5U6 513 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 TMEM185BQ9H7F4 350 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 NKIRAS2Q9NYR9 191 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 WNT16Q9UBV4 365 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SUSD2Q9UGT4 822 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 TRAV36DV7A0A075B6V5 113 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 H3BML4 177 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SIGLEC6O43699 453 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 GMDSO60547 372 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 TXNDC12O95881 172 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SPARCP09486 303 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 DPP4P27487 766 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 IL10RAQ13651 578 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 FCN2Q15485 313 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 C1orf140Q5VVS0 124 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 FAM205BPQ63HN1 556 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 PYHIN1Q6K0P9 492 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 LINGO2Q7L985 606 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 GLB1L2Q8IW92 636 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 SLC43A2Q8N370 569 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 OR2G2Q8NGZ5 317 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 RPS4Y2Q8TD47 263 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 NSMAFQ92636 917 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 LRFN5Q96NI6 719 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 ZNF768Q9H5H4 540 aaKnown RBP10.62□□□□□ -0.71
RHO-201ENST00000296271 TAS2R10Q9NYW0 307 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 OR5V1Q9UGF6 321 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 B9D1Q9UPM9 204 aa10.62□□□□□ -0.71
RHO-201ENST00000296271 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 NCOR1O75376 2440 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 OR4C45A6NMZ5 311 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 PATE3B3GLJ2 98 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 NPIPB7O75200 414 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 PTBP1P26599 531 aaKnown RBP eCLIP10.61□□□□□ -0.71
RHO-201ENST00000296271 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
RHO-201ENST00000296271 BCL2A1Q16548 175 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 NKAIN1Q4KMZ8 207 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 CCDC58Q4VC31 144 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 WDR38Q5JTN6 314 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 OVCH1Q7RTY7 1134 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 ANKRD37Q7Z713 158 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 BIVMQ86UB2 503 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 TOMM5Q8N4H5 51 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 OR2T4Q8NH00 348 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 OR52I2Q8NH67 350 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 INTS14Q96SY0 518 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 GAL3ST1Q99999 423 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 SEMA4CQ9C0C4 833 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 ELOVL3Q9HB03 270 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 MED29Q9NX70 200 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 MRTO4Q9UKD2 239 aaKnown RBP10.61□□□□□ -0.71
RHO-201ENST00000296271 FBXL3Q9UKT7 428 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 SPATA2Q9UM82 520 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 LOC101059948A0A1B0GTJ6 334 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 TRABD2BA6NFA1 517 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 TO15178 435 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 ORC5O43913 435 aa10.61□□□□□ -0.71
RHO-201ENST00000296271 GATBO75879 557 aaKnown RBP10.61□□□□□ -0.71
RHO-201ENST00000296271 RENP00797 406 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms