RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PDCD5O14737 125 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 SULT1B1O43704 296 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 KRT33AO76009 404 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 ALDOBP05062 364 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 NGFRP08138 427 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 IFNGR1P15260 489 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 RAP2BP61225 183 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 OLFML2AQ68BL7 652 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 KANSL1Q7Z3B3 1105 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 CNN2Q99439 309 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF304Q9HCX3 659 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 POLE3Q9NRF9 147 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 MRPL15Q9P015 296 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 PIPOXQ9P0Z9 390 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 CTSFQ9UBX1 484 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 GMEB2Q9UKD1 530 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 TRBV2A0A0J9YWF9 115 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 A0A1W2PQM1 296 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 BLACEA4D250 179 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 NPIPB9F8W1W9 429 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 HRGP04196 525 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 CFIP05156 583 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 SLC37A1P57057 533 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 GGTLC2Q14390 218 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 MED25Q71SY5 747 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 OR52I2Q8NH67 350 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 SAP25Q8TEE9 199 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 SMAD5Q99717 465 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 REG4Q9BYZ8 158 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 CHIAQ9BZP6 476 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 NXF5Q9H1B4 397 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 SDHAF2Q9NX18 166 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 SESN1Q9Y6P5 492 aa16.64■□□□□ 0.25
PDLIM3-201ENST00000284767 A0A0B4J2E0 115 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 A0A1B0GX12 115 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 MFSD2BA6NFX1 497 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 OR6C65A6NJZ3 312 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 L7N2F9 121 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ARPC1BO15143 372 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 GPRIN2O60269 458 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ADRB1P08588 477 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 TDGF1P13385 188 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 FBLP22087 321 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 MRPS10P82664 201 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 SERTAD2Q14140 314 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 TMEM255AQ5JRV8 349 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ARHGAP40Q5TG30 622 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 WDR74Q6RFH5 385 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 MAML2Q8IZL2 1156 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 SLC38A9Q8NBW4 561 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 FCAMRQ8WWV6 532 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ELMOD3Q96FG2 381 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 DERL3Q96Q80 235 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 GAL3ST4Q96RP7 486 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ZNF559Q9BR84 538 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 AIFM2Q9BRQ8 373 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 UTP23Q9BRU9 249 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 TMEM27Q9HBJ8 222 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 TAS2R5Q9NYW4 299 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 SERTAD3Q9UJW9 196 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ICAM5Q9UMF0 924 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ADAMTS20P59510 1910 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 IGKV3D-11A0A0A0MRZ8 115 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 AIPO00170 330 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 SERPINI2O75830 405 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 TIAF1O95411 115 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 ATF4P18848 351 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 SRMP19623 302 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 CXCL2P19875 107 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 APOOLQ6UXV4 268 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 PMM1Q92871 262 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 MRI1Q9BV20 369 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 EVA1AQ9H8M9 152 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 NOX3Q9HBY0 568 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 GPN1Q9HCN4 374 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 KCNMB2Q9Y691 235 aa16.63■□□□□ 0.25
PDLIM3-201ENST00000284767 IFITM5A6NNB3 132 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 C17orf51A8MQB3 221 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 KHDRBS3O75525 346 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 NFYAP23511 347 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 EDNRAP25101 427 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ZXDAP98168 799 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 NSDHLQ15738 373 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SLC25A25Q6KCM7 469 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 KIRREL2Q6UWL6 708 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 LANCL3Q6ZV70 420 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SLC35F2Q8IXU6 374 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MEIOBQ8N635 442 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MOSPD2Q8NHP6 518 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SNX33Q8WV41 574 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SLC25A38Q96DW6 304 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ZMYND19Q96E35 227 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MRPL48Q96GC5 212 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 TTTY10Q9BZA0 68 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SEMA5BQ9P283 1151 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 MKL2Q9ULH7 1088 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 ANKRD20A5PA0PJZ0 165 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 SNRPGP15A8MWD9 76 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 OR2A4O95047 310 aa16.62■□□□□ 0.25
PDLIM3-201ENST00000284767 IL5P05113 134 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms