RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ANXA3P12429 323 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 HOXB2P14652 356 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PSMC3P17980 439 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PSMB5P28074 263 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 EPHA2P29317 976 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 TNFSF8P32971 234 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 MAGEA6P43360 314 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 CAPZBP47756 277 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 RPL14P50914 215 aaKnown RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ARF6P62330 175 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ZP4Q12836 540 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 KLF5Q13887 457 aaPredicted RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 ATXN7L3Q14CW9 347 aaPredicted RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 PDK2Q15119 407 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 MLF2Q15773 248 aaPredicted RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 IMPG1Q17R60 797 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ACCSLQ4AC99 568 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 SLC22A6Q4U2R8 563 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 FAM78AQ5JUQ0 283 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 SEL1L2Q5TEA6 688 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ZNF626Q68DY1 528 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 REEP3Q6NUK4 255 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PRMT9Q6P2P2 845 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 LEG1Q6P5S2 330 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ENPP6Q6UWR7 440 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 C17orf107Q6ZR85 190 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ASRGL1Q7L266 308 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 C17orf64Q86WR6 236 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ZNF677Q86XU0 584 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 JAGN1Q8N5M9 183 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 CDRT4Q8N9R6 151 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR2AK2Q8NG84 335 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR4F6Q8NGB9 312 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR11H4Q8NGC9 324 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR52I1Q8NGK6 324 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 OR6X1Q8NH79 312 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 RDH11Q8TC12 318 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 GPR151Q8TDV0 419 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 NTN5Q8WTR8 489 aaPredicted RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 TMEM174Q8WUU8 243 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 SLC35C1Q96A29 364 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PAGE5Q96GU1 130 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 CELF6Q96J87 481 aaKnown RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 RNF170Q96K19 258 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 PGLYRP2Q96PD5 576 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 XPO6Q96QU8 1125 aaKnown RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 TM2D2Q9BX73 214 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 QTRT1Q9BXR0 403 aaKnown RBP3.99□□□□□ -1.77
CD44-202ENST00000278385 PRSS22Q9GZN4 317 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 NEUROG2Q9H2A3 272 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 SYT4Q9H2B2 425 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 C12orf10Q9HB07 376 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 NMRAL1Q9HBL8 299 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ZC4H2Q9NQZ6 224 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 SIRT7Q9NRC8 400 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 FGF21Q9NSA1 209 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 TAS2R9Q9NYW1 312 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 FLRT3Q9NZU0 649 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 CHD7Q9P2D1 2997 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ZNF319Q9P2F9 582 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 GHRLQ9UBU3 117 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 TINAGQ9UJW2 476 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 ANAPC7Q9UJX3 599 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 POMT2Q9UKY4 750 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 VCANP13611 3396 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 UNC80Q8N2C7 3258 aa3.99□□□□□ -1.77
CD44-202ENST00000278385 LOXHD1Q8IVV2 1947 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 A0A1B0GUS0 222 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 DNAJC9-AS1A6NH13 148 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 GOLGA6L10A6NI86 522 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CENPXA8MT69 81 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 TMEM114B3SHH9 223 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CLDN34H7C241 214 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 M0QXV9 152 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SIRPB1O00241 398 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 GAPDHSO14556 408 aaPredicted RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 TFECO14948 347 aaPredicted RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 MLNRO43193 412 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 SLC19A2O60779 497 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 HSBP1O75506 76 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 KRT33AO76009 404 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 DIRAS1O95057 198 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 NXPH2O95156 264 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 LRATO95237 230 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 LDOC1O95751 146 aaPredicted RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 LATS1O95835 1130 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 HLA-HP01893 362 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 IFNW1P05000 195 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 ATP1A1P05023 1023 aaKnown RBP3.98□□□□□ -1.77
CD44-202ENST00000278385 CTRB1P17538 263 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 RAB4AP20338 218 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 IMPDH1P20839 514 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CA4P22748 312 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 GLRA1P23415 457 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 G0S2P27469 103 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 NBL1P41271 181 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CCR2P41597 374 aa3.98□□□□□ -1.77
CD44-202ENST00000278385 CXCR4P61073 352 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms