RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PRTFDC1Q9NRG1 225 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ALKBH4Q9NXW9 302 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 TAS2R16Q9NYV7 291 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ABCD2Q9UBJ2 740 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 STOML2Q9UJZ1 356 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ERVK-11Q9UQG0 969 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 HS3ST2Q9Y278 367 aa2.63□□□□□ -1.99
HERC4-201ENST00000277817 ASCC3Q8N3C0 2202 aaKnown RBP2.63□□□□□ -1.99
HERC4-201ENST00000277817 FLNBO75369 2602 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 LRRK2Q5S007 2527 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TRBV4-1A0A0J9YWV2 114 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZC3H12DA2A288 527 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 C12orf71A8MTZ7 269 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PPM1DO15297 605 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TLX3O43711 291 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 B4GALT3O60512 393 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 UPK1BO75841 260 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GLCEO94923 617 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF888P0CJ79 500 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 SMIM18P0DKX4 95 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GP1BBP13224 206 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CD59P13987 128 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 STOMP27105 288 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CD40LGP29965 261 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR3A3P47888 321 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR3A2P47893 321 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PRLHRP49683 370 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 MAZP56270 477 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 WNT4P56705 351 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CLRN1P58418 232 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CXCR4P61073 352 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 RPS15AP62244 130 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 SNRPD2P62316 118 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 CDK3Q00526 305 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ARFRP1Q13795 201 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 HSD17B12Q53GQ0 312 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TCEAL5Q5H9L2 206 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ALG10BQ5I7T1 473 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SERTAD4-AS1Q5TG53 156 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR2G6Q5TZ20 316 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SLC25A25Q6KCM7 469 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LCTLQ6UWM7 567 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LYPD4Q6UWN0 246 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 FAM159AQ6UWV7 190 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF550Q7Z398 422 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 BCDIN3DQ7Z5W3 292 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 PAQR7Q86WK9 346 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 VRK2Q86Y07 508 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF101Q8IZC7 436 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SLC7A5P1Q8MH63 180 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 BCORP1Q8N888 145 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR8J2Q8NGG1 315 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR6Q1Q8NGQ2 317 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 RHOXF1Q8NHV9 184 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 DNAJA4Q8WW22 397 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 EMG1Q92979 244 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF503Q96F45 646 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 C16orf58Q96GQ5 468 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CCDC115Q96NT0 180 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SFXN1Q9H9B4 322 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GPN2Q9H9Y4 310 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 MYNNQ9NPC7 610 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TMEM74BQ9NUR3 256 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 C14orf105Q9NVL8 296 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 IL37Q9NZH6 218 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 KLRF1Q9NZS2 232 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 NUFIP1Q9UHK0 495 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 SERTAD3Q9UJW9 196 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CDH10Q9Y6N8 788 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 MAU2Q9Y6X3 613 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TCF20Q9UGU0 1960 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 F5P12259 2224 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SRCAPQ6ZRS2 3230 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 C13orf42A0A1B0GVH6 325 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TRAPPC13A5PLN9 417 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LRRC3CA6NJW4 275 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PCP4L1A6NKN8 68 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF726A6NNF4 738 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LRRN3E7EW58 273 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 NPIPA5E9PKD4 350 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 I3L521 148 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SCO2O43819 266 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PRKRAO75569 313 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF432O94892 652 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GYPBP06028 91 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CRYGBP07316 175 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 RAB40ALP0C0E4 278 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ADORA3P0DMS8 318 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ITGAMP11215 1152 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PGAM2P15259 253 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF20P17024 532 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF28P17035 718 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LORP23490 312 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 DUSP1P28562 367 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TNFSF8P32971 234 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 NBL1P41271 181 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ALDH3B2P48448 385 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GPR143P51810 404 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CAV3P56539 151 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TAS2R43P59537 309 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms