RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 B3GALT5Q9Y2C3 310 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 PRSS37A4D1T9 235 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 TRIM64A6NGJ6 449 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 CENPBD1B2RD01 187 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 HSD17B12Q53GQ0 312 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 DCAF10Q5QP82 559 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
SSR3-201ENST00000265044 SLC16A12Q6ZSM3 486 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 PPP1R32Q7Z5V6 425 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 MFSD8Q8NHS3 518 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 ELP5Q8TE02 316 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 TSPAN32Q96QS1 320 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 PRRX2Q99811 253 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 ADAM19Q9H013 955 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 ELOVL3Q9HB03 270 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 C12orf10Q9HB07 376 aa8.41□□□□□ -1.06
SSR3-201ENST00000265044 COL4A2P08572 1712 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 LRP4O75096 1905 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 KLF4O43474 513 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 DOK2O60496 412 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 CLEC2LP0C7M8 214 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 SLC15A1P46059 708 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 CSNK1A1P48729 337 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 DSCR4P56555 118 aaPredicted RBP8.4□□□□□ -1.06
SSR3-201ENST00000265044 EGR4Q05215 589 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 MEP1BQ16820 701 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 EMC4Q5J8M3 183 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 SLC35D3Q5M8T2 416 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 AGAP7PQ5VUJ5 663 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 P4HA3Q7Z4N8 544 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 OR5AK2Q8NH90 309 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 TBC1D15Q8TC07 691 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 HTRA1Q92743 480 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 AGAP4Q96P64 663 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 SLC30A2Q9BRI3 323 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 ACOXLQ9NUZ1 547 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 RHBDL2Q9NX52 303 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 PCDHGB6Q9Y5F9 930 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 ZNF407Q9C0G0 2248 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 CYC1P08574 325 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 RPS19P39019 145 aaKnown RBP8.4□□□□□ -1.06
SSR3-201ENST00000265044 MLF1P58340 268 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 FOXK1P85037 733 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 AIMP2Q13155 320 aaKnown RBP8.4□□□□□ -1.06
SSR3-201ENST00000265044 OR1C1Q15619 314 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 PLA2G2CQ5R387 149 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 HBMQ6B0K9 141 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 VASH1Q7L8A9 365 aaPredicted RBP8.4□□□□□ -1.06
SSR3-201ENST00000265044 NPEPL1Q8NDH3 523 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 ZPLD1Q8TCW7 415 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 HOXB13Q92826 284 aaPredicted RBP8.4□□□□□ -1.06
SSR3-201ENST00000265044 WDR76Q9H967 626 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 PLEKHA1Q9HB21 404 aa8.4□□□□□ -1.06
SSR3-201ENST00000265044 LOC101059948A0A1B0GTJ6 334 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 OR2M5A3KFT3 312 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 TNFSF11O14788 317 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 HLA-DOBP13765 273 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 ZNF84P51523 738 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 FXYD6P3P58550 94 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 PLAURQ03405 335 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 LTBQ06643 244 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 SSX1Q16384 188 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 EXOSC6Q5RKV6 272 aaKnown RBP8.4□□□□□ -1.07
SSR3-201ENST00000265044 LIPNQ5VXI9 398 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 SNX29P2Q8IUI4 249 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 GPR137CQ8N3F9 429 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 ZNF283Q8N7M2 679 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 OR2M3Q8NG83 312 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 TM9SF4Q92544 642 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 ZBTB8AQ96BR9 441 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 IMMP1LQ96LU5 166 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 ZFP3Q96NJ6 502 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 COQ7Q99807 217 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 SMURF1Q9HCE7 757 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 NOX1Q9Y5S8 564 aa8.4□□□□□ -1.07
SSR3-201ENST00000265044 KLRC4-KLRK1H3BQV0 150 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 PLPP3O14495 311 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 CXCL13O43927 109 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 EIF1BO60739 113 aaKnown RBP8.39□□□□□ -1.07
SSR3-201ENST00000265044 NCR1O76036 304 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 HNRNPCP07910 306 aaKnown RBP eCLIP8.39□□□□□ -1.077e-7■■□□□ 11.5
SSR3-201ENST00000265044 CPEP16870 476 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 IL11P20809 199 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 CD97P48960 835 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 FMODQ06828 376 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 DEFB109BQ30KR1 87 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 SLC25A30Q5SVS4 291 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 ATP1A1-AS1Q5TC04 95 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 CORO6Q6QEF8 472 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 TMPPEQ6ZT21 453 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 SLC16A9Q7RTY1 509 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 OR6V1Q8N148 313 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 GALNT16Q8N428 558 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 ZSCAN1Q8NBB4 408 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 TXNDC15Q96J42 360 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 NDUFB11Q9NX14 153 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 AK6Q9Y3D8 172 aaKnown RBP8.39□□□□□ -1.07
SSR3-201ENST00000265044 FKBP7Q9Y680 259 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 A0A1W2PQ72 361 aa8.39□□□□□ -1.07
SSR3-201ENST00000265044 METTL15A6NJ78 407 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms