RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 OTOFQ9HC10 1997 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 MEIOCA2RUB1 952 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 OR6C68A6NDL8 312 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 KLRC4-KLRK1H3BQV0 150 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 CLDN12P56749 244 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 RING1Q06587 406 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 CDCA2Q69YH5 1023 aaPredicted RBP10.55□□□□□ -0.72
PTPN4-201ENST00000263708 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 LETMD1Q6P1Q0 360 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 C19orf35Q6ZS72 473 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 AGBL5Q8NDL9 886 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 CDCP1Q9H5V8 836 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 SPO11Q9Y5K1 396 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 SLC5A10A0PJK1 596 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 SSSCA1O60232 199 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 STACQ99469 402 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ACOXLQ9NUZ1 547 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ONECUT1Q9UBC0 465 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 GABRPO00591 440 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ARHGAP33O14559 1287 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 GPR37O15354 613 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 RPS16P62249 146 aaKnown RBP10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 C17orf107Q6ZR85 190 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 OR10K1Q8NGX5 313 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF785A8K8V0 405 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ITGAMP11215 1152 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 BMI1P35226 326 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 NTHL1P78549 312 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 MFAP5Q13361 173 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 ACKR1Q16570 336 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 TAZQ16635 292 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 OR2B11Q5JQS5 317 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 OR2G3Q8NGZ4 309 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM163Q8TC26 289 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 SLCO2A1Q92959 643 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 INPP5EQ9NRR6 644 aa10.55□□□□□ -0.72
PTPN4-201ENST00000263708 MAP1BP46821 2468 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 PPP1R2P9O14990 202 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 SULT1C4O75897 302 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 BMPR1AP36894 532 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 HSF1Q00613 529 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF90Q03938 601 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 GPRIN1Q7Z2K8 1008 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 LRRTM1Q86UE6 522 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 P2RY12Q9H244 342 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 DUSP22Q9NRW4 184 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 HCFC1R1Q9NWW0 138 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF835Q9Y2P0 537 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 SIT1Q9Y3P8 196 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 LRRC3CA6NJW4 275 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ONECUT2O95948 504 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ITGB7P26010 798 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF133P52736 654 aaPredicted RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM200AQ86VY9 491 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 PIGTQ969N2 578 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 TNFRSF19Q9NS68 423 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 SEMA4GQ9NTN9 838 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 SIX4Q9UIU6 781 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 P2RY10O00398 339 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 CPMP14384 443 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 CEACAM7Q14002 265 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 PGAP1Q75T13 922 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OR5M1Q8NGP8 315 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 MED18Q9BUE0 208 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 RNF186Q9NXI6 227 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OSGIN1Q9UJX0 560 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 TMEM221A6NGB7 291 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 H7BYZ3 331 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OR8G3PP0DMU2 310 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 TSEN54Q7Z6J9 526 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 SEMA6DQ8NFY4 1073 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 YIPF5Q969M3 257 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 NOX4Q9NPH5 578 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 CACNG3O60359 315 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 IL4RP24394 825 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 RBM12BQ8IXT5 1001 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OR2T6Q8NHC8 308 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 FIBINQ8TAL6 211 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 DVL3Q92997 716 aaPredicted RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 RANGRFQ9HD47 186 aaPredicted RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OR52A1Q9UKL2 312 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 MT-ND4LP03901 98 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 NPY4RP50391 375 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 ERHP84090 104 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 OR6V1Q8N148 313 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 FUBP1Q96AE4 644 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 AGPAT4Q9NRZ5 378 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 SLIT2O94813 1529 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 GATCO43716 136 aaKnown RBP10.54□□□□□ -0.72
PTPN4-201ENST00000263708 DFFBO76075 338 aa10.54□□□□□ -0.72
PTPN4-201ENST00000263708 HIST2H3AQ71DI3 136 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms