RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SLC16A6O15403 523 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 IGHEP01854 428 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ANXA7P20073 488 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 S100A11P31949 105 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 SNRPGP62308 76 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 CHRNEQ04844 493 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 SECTM1Q8WVN6 248 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 HHIPQ96QV1 700 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 KIAA1551Q9HCM1 1747 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 H0YGG7 62 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 HSPB6O14558 160 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 DVL1O14640 695 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 OMGP23515 440 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 PPT1P50897 306 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 DVL1P1P54792 670 aaPredicted RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 OPCMLQ14982 345 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ADGRE4PQ86SQ3 457 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 FJX1Q86VR8 437 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 RNF175Q8N4F7 328 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 FBXL4Q9UKA2 621 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ABOP16442 354 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ZNF93P35789 620 aaPredicted RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 MRPS21P82921 87 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 CREBZFQ9NS37 354 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 PRSS21Q9Y6M0 314 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 PRICKLE3O43900 615 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 HOXD9P28356 352 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 TMEM31Q5JXX7 168 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 HS3ST2Q9Y278 367 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 TMEM184BQ9Y519 407 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 EDN1P05305 212 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 CDONQ4KMG0 1287 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 KDF1Q8NAX2 398 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 NOX4Q9NPH5 578 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 RPS25P62851 125 aaKnown RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 ZP2Q05996 745 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SMN1Q16637 294 aaKnown RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC35D3Q5M8T2 416 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 STEAP1BQ6NZ63 245 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 GRAMD2AQ8IUY3 354 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 C1orf87Q8N0U7 546 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC25A46Q96AG3 418 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 GALNT9Q9HCQ5 603 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 A0A0B4J2A0 478 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 TIMM8AO60220 97 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 CSO75390 466 aaKnown RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 Q6ZTK2 550 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 ARFGAP1Q8N6T3 406 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 ABHD6Q9BV23 337 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SHPKQ9UHJ6 478 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 TRDV1A0A1B0GX56 115 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SYT5O00445 386 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 TRAF3IP2O43734 574 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 CYTIPO60759 359 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 FLI1Q01543 452 aaPredicted RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 USP51Q70EK9 711 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 OR2L13Q8N349 312 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC46A1Q96NT5 459 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 FOXN4Q96NZ1 517 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SIAEQ9HAT2 523 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC22A11Q9NSA0 550 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 A6NL46 340 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 RPE65Q16518 533 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 LINC00299Q6ZSB3 139 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 SYT11Q9BT88 431 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 CHRNA9Q9UGM1 479 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 CD207Q9UJ71 328 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 ACOD1A6NK06 481 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 CTSCP53634 463 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 TAZQ16635 292 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 DCAF12Q5T6F0 453 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 MDGA2Q7Z553 956 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 UBTD2Q8WUN7 234 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 EXOSC3Q9NQT5 275 aaKnown RBP16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 RPH3ALQ9UNE2 315 aa16.17■□□□□ 0.18
NOTCH3-201ENST00000263388 A0A1B0GVG6 124 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SNRPBP14678 240 aaKnown RBP16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 KDM4DQ6B0I6 523 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 OR11L1Q8NGX0 322 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SEC22CQ9BRL7 303 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 USP54Q70EL1 1684 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SSC5DA1L4H1 1573 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 ZNF587BE7ETH6 402 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 HLA-FP30511 346 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 TAGLN2P37802 199 aaKnown RBP16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SNCAP37840 140 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SSR4P51571 173 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC51BQ86UW2 128 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 NECAP2Q9NVZ3 263 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 LRIT1Q9P2V4 623 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 CORINQ9Y5Q5 1042 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 EIF1BO60739 113 aaKnown RBP16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 CLDN1O95832 211 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC10A3P09131 477 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 SBK2P0C263 348 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 GSK3AP49840 483 aa16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 GRB2P62993 217 aaKnown RBP16.16■□□□□ 0.18
NOTCH3-201ENST00000263388 MED30Q96HR3 178 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms