RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 CD247P20963 164 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 DRD4P21917 467 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 GLRXP35754 106 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 ALDH3B1P43353 468 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 EVX1P49640 407 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 ATP4BP51164 291 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF84P51523 738 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 CDH15P55291 814 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 SRSF2Q01130 221 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 RBBP4Q09028 425 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 RAB39AQ14964 217 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 KRTAP24-1Q3LI83 254 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 PHYHD1Q5SRE7 291 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 INTS11Q5TA45 600 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 RGS7BPQ6MZT1 257 aaPredicted RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 TMEM154Q6P9G4 183 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 SLC35D2Q76EJ3 337 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 PIWIL3Q7Z3Z3 882 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 NANOGNBQ7Z5D8 188 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 PATL1Q86TB9 770 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 GLCCI1Q86VQ1 547 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 FUNDC1Q8IVP5 155 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 MSRB3Q8IXL7 192 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 RDH5Q92781 318 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 THOC1Q96FV9 657 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 MOGAT1Q96PD6 335 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 MRPL37Q9BZE1 423 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 OR51B6Q9H340 312 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 INTS9Q9NV88 658 aaKnown RBP10.57□□□□□ -0.72
TRAF4-202ENST00000262396 SLC7A8Q9UHI5 535 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 GRIP1Q9Y3R0 1128 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 FBN3Q75N90 2809 aa10.57□□□□□ -0.72
TRAF4-202ENST00000262396 IQCMA0A1B0GVH7 501 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 A0A1W2PRG6 482 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF503-AS2A6NEH8 195 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 B4DSR2 109 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 BLOC1S5-TXNDC5H3BN57 136 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 CHP2O43745 196 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 FMO6PO60774 539 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 MFN2O95140 757 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 BCL10O95999 233 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 MT-ND5P03915 603 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 OR8G3PP0DMU2 310 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 SAGP10523 405 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-202ENST00000262396 GPX2P18283 190 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 GIFP27352 417 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 MTPNP58546 118 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 HSF2Q03933 536 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 MELKQ14680 651 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 ALKBH6Q3KRA9 238 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 SLC36A2Q495M3 483 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 ENTPD8Q5MY95 495 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 BEND6Q5SZJ8 279 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-202ENST00000262396 SLC16A14Q7RTX9 510 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 RFLNBQ8N5W9 214 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 OR1J2Q8NGS2 313 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 RASSF5Q8WWW0 418 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 SLC41A3Q96GZ6 507 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 CPPED1Q9BRF8 314 aaPredicted RBP10.56□□□□□ -0.72
TRAF4-202ENST00000262396 LPAR2Q9HBW0 351 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 GLTPQ9NZD2 209 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 SLC7A7Q9UM01 511 aa10.56□□□□□ -0.72
TRAF4-202ENST00000262396 TMEM129A0AVI4 362 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 TRAPPC13A5PLN9 417 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 IGHG1P01857 330 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 TACSTD2P09758 323 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 PATE4P0C8F1 98 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 FAM157BP0CG42 384 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF14P17017 642 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-202ENST00000262396 CCNOP22674 350 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 IFNA8P32881 189 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 APLNRP35414 380 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 GUCA1AP43080 201 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-202ENST00000262396 MAD2L1BPQ15013 274 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-202ENST00000262396 TRIP10Q15642 601 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 MOGQ16653 247 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 TBC1D28Q2M2D7 210 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 MMEL1Q495T6 779 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 RUNDC3AQ59EK9 446 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 HDDC2Q7Z4H3 204 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 DPPA2Q7Z7J5 298 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 COMTD1Q86VU5 262 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 SLC22A24Q8N4F4 322 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 SLC30A7Q8NEW0 376 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 OR6T1Q8NGN1 323 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 OR6X1Q8NH79 312 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 ADAMTS16Q8TE57 1224 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 C11orf40Q8WZ69 217 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 SLC25A44Q96H78 314 aaPredicted RBP10.55□□□□□ -0.72
TRAF4-202ENST00000262396 MPP4Q96JB8 637 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 ATP6V1G3Q96LB4 118 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 CGREF1Q99674 301 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 SH3GL3Q99963 347 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 ZNF416Q9BWM5 594 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 C1orf198Q9H425 327 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 IKZF5Q9H5V7 419 aa10.55□□□□□ -0.72
TRAF4-202ENST00000262396 CCNB1IP1Q9NPC3 277 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms