RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 OR13C2Q8NGS9 318 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 B4GALNT2Q8NHY0 566 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 ZNF563Q8TA94 476 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 MUL1Q969V5 352 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 ZNF524Q96C55 264 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 SGTBQ96EQ0 304 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 KLHDC3Q9BQ90 382 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 COPS4Q9BT78 406 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 CCDC90BQ9GZT6 254 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 UBQLN3Q9H347 655 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 ZNF703Q9H7S9 590 aaPredicted RBP11.85□□□□□ -0.51
SGCA-201ENST00000262018 METTL7AQ9H8H3 244 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 HHATLQ9HCP6 504 aa11.85□□□□□ -0.51
SGCA-201ENST00000262018 H3BSA7 217 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SURF4O15260 269 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SIAH2O43255 324 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 OR7A10O76100 309 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SNX4O95219 450 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SAGP10523 405 aaPredicted RBP11.84□□□□□ -0.51
SGCA-201ENST00000262018 FUT1P19526 365 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 CASP3P42574 277 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 MASP1P48740 699 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SLC9A3P48764 834 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SUMO3P55854 103 aaPredicted RBP11.84□□□□□ -0.51
SGCA-201ENST00000262018 C17orf67Q0P5P2 114 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 FHL1Q13642 323 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SYT14P1Q58G82 188 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 CLEC12AQ5QGZ9 265 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 PRAMEF20Q5VT98 475 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 NSUN5P2Q63ZY6 315 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SLC30A6Q6NXT4 461 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 SLC46A3Q7Z3Q1 461 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 MEIOBQ8N635 442 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 OR52L1Q8NGH7 329 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 GPR119Q8TDV5 335 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 DUSP19Q8WTR2 217 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 LIPHQ8WWY8 451 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 ISOC1Q96CN7 298 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 TRIB1Q96RU8 372 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 ANGPTL4Q9BY76 406 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 AMBNQ9NP70 447 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 DNAJC27Q9NZQ0 273 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 KLRF1Q9NZS2 232 aa11.84□□□□□ -0.51
SGCA-201ENST00000262018 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 IGLV3-32A0A0A0MS00 114 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 C17orf51A8MQB3 221 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 BHLHE40O14503 412 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 GNB5O14775 395 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 CD5LO43866 347 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 IL18BPO95998 194 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 TACR3P29371 465 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 PTGDSP41222 190 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 IRF3Q14653 427 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 TOMM34Q15785 309 aaPredicted RBP11.83□□□□□ -0.52
SGCA-201ENST00000262018 WIPI1Q5MNZ9 446 aaPredicted RBP11.83□□□□□ -0.52
SGCA-201ENST00000262018 OAFQ86UD1 273 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
SGCA-201ENST00000262018 LNX2Q8N448 690 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 STX19Q8N4C7 294 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 ZNF582Q96NG8 517 aaPredicted RBP11.83□□□□□ -0.52
SGCA-201ENST00000262018 TNFRSF13CQ96RJ3 184 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 RACGAP1Q9H0H5 632 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 ACKR4Q9NPB9 350 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 ACOT13Q9NPJ3 140 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 BOKQ9UMX3 212 aaPredicted RBP11.83□□□□□ -0.52
SGCA-201ENST00000262018 BAIAP2Q9UQB8 552 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 CAMK2AQ9UQM7 478 aa11.83□□□□□ -0.52
SGCA-201ENST00000262018 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
SGCA-201ENST00000262018 TRAV27A0A087WT01 109 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 ZNF99A8MXY4 864 aaPredicted RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 PRODHO43272 600 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 FAM157CP0CG43 387 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 TMIGD3P0DMS9 266 aaPredicted RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 MAP2K4P45985 399 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 ATP5J2P56134 94 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 EGR4Q05215 589 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 ST3GAL4Q11206 333 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 QPRTQ15274 297 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 SF3B4Q15427 424 aaKnown RBP eCLIP11.82□□□□□ -0.52
SGCA-201ENST00000262018 TBCEQ15813 527 aaPredicted RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 TMEM44Q2T9K0 475 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 BICRALQ6AI39 1079 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 CLVS1Q8IUQ0 354 aaPredicted RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 NTNG2Q96CW9 530 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 NMD3Q96D46 503 aaKnown RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 TMEM41AQ96HV5 264 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 LRR1Q96L50 414 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 JSRP1Q96MG2 331 aaPredicted RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 TIMP4Q99727 224 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 PROK2Q9HC23 129 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 ZFP64Q9NPA5 681 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 SDHAF3Q9NRP4 125 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 MRPS18AQ9NVS2 196 aaKnown RBP11.82□□□□□ -0.52
SGCA-201ENST00000262018 TAS2R10Q9NYW0 307 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 OSGIN1Q9UJX0 560 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 ZNF337Q9Y3M9 751 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms