RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SLC7A7Q9UM01 511 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 CELSR2Q9HCU4 2923 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 TRAV36DV7A0A075B6V5 113 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 IGKV3D-15A0A087WSY6 115 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 FTCDNL1E5RQL4 147 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 RAMP1O60894 148 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 LYPD3O95274 346 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 TAS2R41P59536 307 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 VBP1P61758 197 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 VLDLRP98155 873 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 FAM69AQ5T7M9 428 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 OR6Q1Q8NGQ2 317 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 DYNC2LI1Q8TCX1 351 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 SLC41A3Q96GZ6 507 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 HSH2DQ96JZ2 352 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 EPYCQ99645 322 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 EMC3Q9P0I2 261 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 AQP7P3A6NL99 342 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 FADS2O95864 444 aaKnown RBP14.88□□□□□ -0.03
SDCBP-201ENST00000260130 SLC16A1P53985 500 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 PIN1Q13526 163 aaPredicted RBP14.88□□□□□ -0.03
SDCBP-201ENST00000260130 IFI44LQ53G44 452 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 FAHD1Q6P587 224 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 GDF7Q7Z4P5 450 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 GEMIN6Q8WXD5 167 aaKnown RBP14.88□□□□□ -0.03
SDCBP-201ENST00000260130 PITX2Q99697 317 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 ELOVL5Q9NYP7 299 aa14.88□□□□□ -0.03
SDCBP-201ENST00000260130 HCFC1P51610 2035 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 CENPEQ02224 2701 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 GPR171O14626 319 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 OR5F1O95221 314 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 IFNW1P05000 195 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 DGCR6Q14129 220 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 TMEM225Q6GV28 225 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 WDR88Q6ZMY6 472 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 MFSD4AQ8N468 514 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 OR6S1Q8NH40 331 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 FCGR1BQ92637 280 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 MARVELD3Q96A59 401 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 DIRAS1O95057 198 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 PTNP21246 168 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 GTF2E2P29084 291 aaKnown RBP14.87□□□□□ -0.03
SDCBP-201ENST00000260130 PCYT1AP49585 367 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 LSM3P62310 102 aaKnown RBP14.87□□□□□ -0.03
SDCBP-201ENST00000260130 SORDQ00796 357 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 FAM27E3Q08E93 113 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 NPRL3Q12980 569 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 SNTB1Q13884 538 aaKnown RBP14.87□□□□□ -0.03
SDCBP-201ENST00000260130 SLC17A1Q14916 467 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 BEND4Q6ZU67 534 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 PRSS27Q9BQR3 290 aa14.87□□□□□ -0.03
SDCBP-201ENST00000260130 SF3B5Q9BWJ5 86 aaKnown RBP14.87□□□□□ -0.03
SDCBP-201ENST00000260130 FZD7O75084 574 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 CD79BP40259 229 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 P2RY4P51582 365 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 MFSD13AQ14CX5 517 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 EXOC3L2Q2M3D2 409 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 LGALS12Q96DT0 336 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF426Q9BUY5 554 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 AASSQ9UDR5 926 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 NOSIPQ9Y314 301 aaKnown RBP14.86□□□□□ -0.03
SDCBP-201ENST00000260130 UNC79Q9P2D8 2635 aa14.86□□□□□ -0.03
SDCBP-201ENST00000260130 VAMP5O95183 116 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 BMP4P12644 408 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 POU2F1P14859 743 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 IFNA8P32881 189 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 KIR2DL3P43628 341 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 UBE2UQ5VVX9 321 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 TFAP2EQ6VUC0 442 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 PRRC1Q96M27 445 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 A4GNTQ9UNA3 340 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 TUBAL3A6NHL2 446 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 BGLAPP02818 100 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 CD36P16671 472 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 GRPRP30550 384 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 OR3A2P47893 321 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 NCS1P62166 190 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 TUBA1BP68363 451 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 LTBQ06643 244 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 ST3GAL3Q11203 375 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 SMN1Q16637 294 aaKnown RBP14.85□□□□□ -0.03
SDCBP-201ENST00000260130 TMEM236Q5W0B7 351 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 TUBA1AQ71U36 451 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 GPAT4Q86UL3 456 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 NKAIN4Q8IVV8 208 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 HRASLS5Q96KN8 279 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 GABARAPL3Q9BY60 117 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 SLC19A3Q9BZV2 496 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 FANCFQ9NPI8 374 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 RASSF1Q9NS23 344 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 RASD1Q9Y272 281 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 B3GALT5Q9Y2C3 310 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 FLVCR1Q9Y5Y0 555 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 PMF1-BGLAPU3KQ54 211 aa14.85□□□□□ -0.03
SDCBP-201ENST00000260130 E9PQ18 207 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 WBP4O75554 376 aaKnown RBP14.84□□□□□ -0.03
SDCBP-201ENST00000260130 CBLP22681 906 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 NTF4P34130 210 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 AHSA2Q719I0 299 aa14.84□□□□□ -0.03
SDCBP-201ENST00000260130 C10orf53Q8N6V4 93 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms