RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 Q499Y3 187 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 OR6V1Q8N148 313 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 KCNE4Q8WWG9 221 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 CORINQ9Y5Q5 1042 aa8.02□□□□□ -1.13
PTCD3-201ENST00000254630 LOC100289279A0A1B0GTE1 492 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SLC22A23A1A5C7 686 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SULT1C2O00338 296 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TNFSF11O14788 317 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SOD1P00441 154 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TPOP07202 933 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TNFSF8P32971 234 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 F2RL1P55085 397 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 RBMS2Q15434 407 aaKnown RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 OR13C9Q8NGT0 318 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 PIGTQ969N2 578 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 CPNE4Q96A23 557 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DAZAP1Q96EP5 407 aaKnown RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 HRASLS5Q96KN8 279 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 MFRPQ9BY79 579 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ZDHHC5Q9C0B5 715 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 FGF22Q9HCT0 170 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 M0R1B8 84 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 MSTNO14793 375 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 OR8U8P0C7N1 319 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF728P0DKX0 622 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 GLULP15104 373 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 KITLGP21583 273 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 RAB11AP62491 216 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 NKX6-1P78426 367 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SFXN4Q6P4A7 337 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TMEM207Q6UWW9 146 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 YRDCQ86U90 279 aaKnown RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 BAHD1Q8TBE0 780 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ISL2Q96A47 359 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TSSK2Q96PF2 358 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 CENPOQ9BU64 300 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 CHST8Q9H2A9 424 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 PPA2Q9H2U2 334 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 COA3Q9Y2R0 106 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 MYO5AQ9Y4I1 1855 aaKnown RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TSPAN11A1L157 253 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DEGS1O15121 323 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 BLVRBP30043 206 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 AKR1C1Q04828 323 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ILKQ13418 452 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 POU4F3Q15319 338 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SPRED3Q2MJR0 410 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DEFB109BQ30KR1 87 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 LPCAT3Q6P1A2 487 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 CYP4V2Q6ZWL3 525 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 OR1N1Q8NGS0 311 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SECTM1Q8WVN6 248 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TAS2R16Q9NYV7 291 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 GNG12Q9UBI6 72 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 PPT2Q9UMR5 302 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TMEM82A0PJX8 343 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 AGPAT2O15120 278 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ICOSLGO75144 302 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 MAKP20794 623 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 PPP2CBP62714 309 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 PPP2CAP67775 309 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 MRPL58Q14197 206 aaKnown RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DUSP5Q16690 384 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 Q6ZNB5 142 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ADGRE4PQ86SQ3 457 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 NLRP8Q86W28 1048 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 OR5AS1Q8N127 324 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 NKAIN3Q8N8D7 197 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 BBS1Q8NFJ9 593 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 GJC3Q8NFK1 279 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 OR5D18Q8NGL1 313 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 KCNG3Q8TAE7 436 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 FRZBQ92765 325 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 OR2M2Q96R28 347 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 NIPSNAP1Q9BPW8 284 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ATP23Q9Y6H3 246 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ABCA3Q99758 1704 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 TNFSF15O95150 251 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ITGBL1O95965 494 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 CLDN12P56749 244 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SORDQ00796 357 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 PLA2G7Q13093 441 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DHRS4L2Q6PKH6 230 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DPPA2Q7Z7J5 298 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 CPEB3Q8NE35 698 aaKnown RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 SEMA6DQ8NFY4 1073 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 GHSRQ92847 366 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 ZNF486Q96H40 463 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DUSP13Q9UII6 198 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 KIF25Q9UIL4 384 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 NPFFR2Q9Y5X5 522 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 DLEC1Q9Y238 1755 aa8.01□□□□□ -1.13
PTCD3-201ENST00000254630 H0YIG0 161 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 CXCL10P02778 98 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 FKBP2P26885 142 aaKnown RBP8□□□□□ -1.13
PTCD3-201ENST00000254630 TRIM23P36406 574 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 ECI1P42126 302 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 EDDM3BP56851 147 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PMPCAQ10713 525 aa8□□□□□ -1.13
PTCD3-201ENST00000254630 PRTGQ2VWP7 1150 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms