RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SLC6A8P48029 635 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 EEF1A1P68104 462 aaKnown RBP12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 EEF1A2Q05639 463 aaKnown RBP12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 RTP2Q5QGT7 225 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 EEF1A1P5Q5VTE0 462 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM180BQ6P0A1 224 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 TMEM81Q6P7N7 255 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 HSD17B13Q7Z5P4 300 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR4N5Q8IXE1 308 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 PELI3Q8N2H9 469 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 GPR137CQ8N3F9 429 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 SYT11Q9BT88 431 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM103A1Q9BTL3 118 aaKnown RBP12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 ACOXLQ9NUZ1 547 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 MOKQ9UQ07 419 aa12.19□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR10A3P58181 314 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 ACOT6Q3I5F7 207 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF534Q76KX8 674 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 CCDC190Q86UF4 302 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRSS35Q8N3Z0 413 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 TSLPQ969D9 159 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 PELI2Q9HAT8 420 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 HSFX1Q9UBD0 423 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR52A1Q9UKL2 312 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 FEZF1A0PJY2 475 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRAMEF27A3QJZ7 478 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 SLC16A7O60669 478 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 SPNP16150 400 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 CATR1Q13166 79 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRAMEF9Q5VWM5 478 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF852Q6ZMS4 543 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 GCDHQ92947 438 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 MYADMQ96S97 322 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 DMRT3Q9NQL9 472 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 RAB22AQ9UL26 194 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 F5H5K5 113 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 QDPRP09417 244 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 JMJD7P0C870 316 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 FPR3P25089 353 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 FCGR2CP31995 323 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 PCP4P48539 62 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 MAP2K6P52564 334 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 HOXC5Q00444 222 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 SYT13Q7L8C5 426 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 TP53INP2Q8IXH6 220 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 PRR18Q8N4B5 295 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR9A4Q8NGU2 314 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 SEH1LQ96EE3 360 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 NXF5Q9H1B4 397 aaKnown RBP12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR10A5Q9H207 317 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR10A2Q9H208 303 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF385DQ9H6B1 395 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 CUTCQ9NTM9 273 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 GLI3P10071 1580 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 TIAM2Q8IVF5 1701 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 CLDN1O95832 211 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 ACHEP22303 614 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 MPGP29372 298 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 CDK5Q00535 292 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 SLC10A1Q14973 349 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 LY6G5CQ5SRR4 150 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 RNLSQ5VYX0 342 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 ADGRE4PQ86SQ3 457 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 TMEM123Q8N131 208 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 IL1F10Q8WWZ1 152 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 NUDT9Q9BW91 350 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 TREX1Q9NSU2 369 aa12.18□□□□□ -0.46
PCDHGA3-201ENST00000253812 K7ERU9 68 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 TNFP01375 233 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 CHRM2P08172 466 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 GDI1P31150 447 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 RAB7AP51149 207 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 C19orf57Q0VDD7 668 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ECH1Q13011 328 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 CTF1Q16619 201 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 MARCH8Q5T0T0 291 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 MKXQ8IYA7 352 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 NECAP1Q8NC96 275 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 LRIG1Q96JA1 1093 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 AKR1E2Q96JD6 320 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 CTDSP1Q9GZU7 261 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ENKD1Q9H0I2 346 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 HRASLSQ9HDD0 168 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 HRASLS2Q9NWW9 162 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 VSX1Q9NZR4 365 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 ADH5P11766 374 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 CPEP16870 476 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 P2RX1P51575 399 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 CDONQ4KMG0 1287 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 WDR89Q96FK6 387 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 BOCQ9BWV1 1114 aa12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 GPR55Q9Y2T6 319 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA3-201ENST00000253812 B4DGG1 531 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms