RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ADAM10O14672 748 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 GPRIN2O60269 458 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 EIF4E2O60573 245 aaKnown RBP16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 SLC25A12O75746 678 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ABHD16AO95870 558 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 BTCP35070 178 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 PNLIPRP2P54317 469 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 CLDN12P56749 244 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 CBFBQ13951 182 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ODF4Q2M2E3 257 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 STPG1Q5TH74 334 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 PYHIN1Q6K0P9 492 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 FAM220AQ7Z4H9 259 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 OR2T4Q8NH00 348 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 ATOH1Q92858 354 aaPredicted RBP16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 MARVELD1Q9BSK0 173 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 LAMP5Q9UJQ1 280 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 IKZF2Q9UKS7 526 aa16.9■□□□□ 0.3
PDLIM4-201ENST00000253754 COL5A1P20908 1838 aaPredicted RBP16.89■□□□□ 0.3
PDLIM4-201ENST00000253754 PCNX3Q9H6A9 2034 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 TMED7-TICAM2A0A0A6YYA0 188 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 SOX2P48431 317 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 RNF4P78317 190 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 SLC36A2Q495M3 483 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 EMC4Q5J8M3 183 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 EEF1A1P5Q5VTE0 462 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 PRSS45Q7RTY3 260 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 ADGRG3Q86Y34 549 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 SLC7A5P1Q8MH63 180 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 CCDC74BQ96LY2 380 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 ABRACLQ9P1F3 81 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 TMED7Q9Y3B3 224 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 CENPXA8MT69 81 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 SLC43A1O75387 559 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 RENP00797 406 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 HLA-DMAP28067 261 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 SLC6A1P30531 599 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 LCN1P31025 176 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 FBXW4P57775 412 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 BCL2A1Q16548 175 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 YIF1BQ5BJH7 314 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 GPR119Q8TDV5 335 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 THEM6Q8WUY1 208 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 OR6C1Q96RD1 312 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 GALNT9Q9HCQ5 603 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 PLSCR3Q9NRY6 295 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 TEKT2Q9UIF3 430 aa16.89■□□□□ 0.29
PDLIM4-201ENST00000253754 INMT-MINDY4F8WBC2 141 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 ANKRD34CP0C6C1 535 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 IL11P20809 199 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 P2RX1P51575 399 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 MRPS15P82914 257 aaKnown RBP16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 ACKR1Q16570 336 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 RHBDD2Q6NTF9 364 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 APCDD1LQ8NCL9 501 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 PLPP5Q8NEB5 264 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 OR10AC1Q8NH08 325 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 GCDHQ92947 438 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 YIPF5Q969M3 257 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 RNF170Q96K19 258 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 KCNG2Q9UJ96 466 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 CACNG2Q9Y698 323 aa16.88■□□□□ 0.29
PDLIM4-201ENST00000253754 ARSBP15848 533 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 POLR2HP52434 150 aaKnown RBP16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 ALKBH1Q13686 389 aaKnown RBP16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 COL28A1Q2UY09 1125 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 PLA1AQ53H76 456 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 PHF19Q5T6S3 580 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 SLC6A19Q695T7 634 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 TMEM53Q6P2H8 277 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 MAMDC2Q7Z304 686 aaPredicted RBP16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 CMTM4Q8IZR5 234 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 OR5AK2Q8NH90 309 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 HAVCR2Q8TDQ0 301 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 METTL21AQ8WXB1 218 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 PMEPA1Q969W9 287 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 OR2B2Q9GZK3 357 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 SPATA2Q9UM82 520 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 PCDHGA9Q9Y5G4 932 aaKnown RBP16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 OR6C76A6NM76 312 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 ORC5O43913 435 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 NPIPB7O75200 414 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 UBL3O95164 117 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 TACSTD2P09758 323 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 CENPAP49450 140 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 DUSP3P51452 185 aaPredicted RBP16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 ACY1Q03154 408 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 C1orf140Q5VVS0 124 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 GPR139Q6DWJ6 353 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 SLC35D2Q76EJ3 337 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 NUP54Q7Z3B4 507 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 ANKRD37Q7Z713 158 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 KDM8Q8N371 416 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 OR51A4Q8NGJ6 313 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 INTS14Q96SY0 518 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 ULBP3Q9BZM4 244 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 AUNIPQ9H7T9 357 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 TAS2R10Q9NYW0 307 aa16.87■□□□□ 0.29
PDLIM4-201ENST00000253754 LNP1A1A4G5 178 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms