RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ATRQ13535 2644 aa14.1□□□□□ -0.15
CLPP-201ENST00000245816 ACOT8O14734 319 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 WNT11O96014 354 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 HPRP00739 348 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 TSPAN19P0C672 248 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 ADORA3P0DMS8 318 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 ATP6V1B2P21281 511 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 CBLP22681 906 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 CDH11P55287 796 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 IL1RL1Q01638 556 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 FLOT2Q14254 428 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 TRAM2Q15035 370 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 C3orf36Q3SXR2 165 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 LCN8Q6JVE9 175 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 HMBOX1Q6NT76 420 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 ANKRD16Q6P6B7 361 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 TMEM108Q6UXF1 575 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 VTCN1Q7Z7D3 282 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 CYP4Z1Q86W10 505 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 C20orf196Q8IYI0 205 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 GPR137CQ8N3F9 429 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 FAM169BQ8N8A8 192 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 RAB3IPQ96QF0 476 aaPredicted RBP14.09□□□□□ -0.15
CLPP-201ENST00000245816 FNDC11Q9BVV2 318 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 REG4Q9BYZ8 158 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 GRIP2Q9C0E4 1043 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 NELFAQ9H3P2 528 aa14.09□□□□□ -0.15
CLPP-201ENST00000245816 COL6A5A8TX70 2615 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 ARPC4-TTLL3A0A0A6YYG9 625 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 NPIPB13A6NJU9 1138 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 ZNF726A6NNF4 738 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 CENPBD1B2RD01 187 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 NPIPB4C9JG80 1138 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 LRRN3E7EW58 273 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 UPK3AO75631 287 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 OR7A10O76100 309 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 FUT1P19526 365 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 AHCYP23526 432 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 TTKP33981 857 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 ROR2Q01974 943 aaKnown RBP14.08□□□□□ -0.16
CLPP-201ENST00000245816 POU3F1Q03052 451 aaPredicted RBP14.08□□□□□ -0.16
CLPP-201ENST00000245816 MST1LQ2TV78 715 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 HIKESHIQ53FT3 197 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 MTX3Q5HYI7 312 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 C1orf146Q5VVC0 180 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 KLHL24Q6TFL4 600 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 ZNF627Q7L945 461 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 SPATA24Q86W54 205 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 PIAS4Q8N2W9 510 aaPredicted RBP14.08□□□□□ -0.16
CLPP-201ENST00000245816 OR1K1Q8NGR3 316 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 OR6X1Q8NH79 312 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 TMEM255BQ8WV15 326 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 SGTBQ96EQ0 304 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 PYURFQ96I23 114 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 HSH2DQ96JZ2 352 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 B3GAT2Q9NPZ5 323 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 ENPP4Q9Y6X5 453 aa14.08□□□□□ -0.16
CLPP-201ENST00000245816 IGHV4-30-2A0A087WSY4 118 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 SLC35F4A4IF30 521 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 FAM171A2A8MVW0 826 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 M0R1B8 84 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 GPRIN2O60269 458 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 PRSS23O95084 383 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 HLA-DOBP13765 273 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 ITGA2P17301 1181 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 RHCEP18577 417 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 UGT2B15P54855 530 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 HDDC2Q7Z4H3 204 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 LRRC17Q8N6Y2 441 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 ACOT11Q8WXI4 607 aaPredicted RBP14.07□□□□□ -0.16
CLPP-201ENST00000245816 BCL2L2Q92843 193 aaPredicted RBP14.07□□□□□ -0.16
CLPP-201ENST00000245816 POP5Q969H6 163 aaKnown RBP14.07□□□□□ -0.16
CLPP-201ENST00000245816 UTP4Q969X6 686 aaKnown RBP14.07□□□□□ -0.16
CLPP-201ENST00000245816 SEC61A2Q9H9S3 476 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 GPR35Q9HC97 309 aa14.07□□□□□ -0.16
CLPP-201ENST00000245816 STX18Q9P2W9 335 aaKnown RBP14.07□□□□□ -0.16
CLPP-201ENST00000245816 YLPM1P49750 1951 aaKnown RBP14.07□□□□□ -0.16
CLPP-201ENST00000245816 HEATR1Q9H583 2144 aaKnown RBP14.06□□□□□ -0.16
CLPP-201ENST00000245816 A0A1W2PRQ8 180 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 AQP12BA6NM10 295 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 ZNF99A8MXY4 864 aaPredicted RBP14.06□□□□□ -0.16
CLPP-201ENST00000245816 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
CLPP-201ENST00000245816 FFAR1O14842 300 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 RNF13O43567 381 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 UMPSP11172 480 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 ERFP50548 548 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 PRKCDQ05655 676 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 DGCR6Q14129 220 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 TAF11Q15544 211 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 TBRG1Q3YBR2 411 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 SLC35D2Q76EJ3 337 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 ZNF771Q7L3S4 317 aaPredicted RBP14.06□□□□□ -0.16
CLPP-201ENST00000245816 NANOGNBQ7Z5D8 188 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 MYPOPQ86VE0 399 aaPredicted RBP14.06□□□□□ -0.16
CLPP-201ENST00000245816 AQP12AQ8IXF9 295 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 DEPDC4Q8N2C3 294 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 FAM86B1Q8N7N1 296 aa14.06□□□□□ -0.16
CLPP-201ENST00000245816 GTPBP3Q969Y2 492 aaKnown RBP14.06□□□□□ -0.16
CLPP-201ENST00000245816 BPIFA2Q96DR5 249 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms