RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 APOBEC1P41238 236 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 IDH3GP51553 393 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 SLC16A1P53985 500 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CDH15P55291 814 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 ACTR3P61158 418 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 KPNB1Q14974 876 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 GLIPR1L2Q4G1C9 344 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CARM1Q86X55 608 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 ADGRG3Q86Y34 549 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CLIP4Q8N3C7 705 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 C1orf162Q8NEQ5 155 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CNOT9Q92600 299 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 ARHGDIGQ99819 225 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 DYNLRB1Q9NP97 96 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 RLIMQ9NVW2 624 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 HDGFL3Q9Y3E1 203 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 A0A096LPE4 126 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 A0A1W2PPZ6 126 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 IMPDH2P12268 514 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 IFNA8P32881 189 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 SLC1A3P43003 542 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 IDH2P48735 452 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 UBE2NP61088 152 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 TBRG1Q3YBR2 411 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CYP4Z1Q86W10 505 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 VANGL1Q8TAA9 524 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 ZNF385AQ96PM9 386 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 SEPHS2Q99611 448 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 NAA11Q9BSU3 229 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 POLR2J2Q9GZM3 115 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 POLR2J3Q9H1A7 115 aaKnown RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 PLK3Q9H4B4 646 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 DENND2DQ9H6A0 471 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-201ENST00000242776 PARPBPQ9NWS1 579 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 AURKCQ9UQB9 309 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
DDX39A-201ENST00000242776 TMED7-TICAM2A0A0A6YYA0 188 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 TMEM72A0PK05 275 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 ZC3H12DA2A288 527 aaKnown RBP11.94□□□□□ -0.5
DDX39A-201ENST00000242776 H0YHG0 523 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 M0R3H8 397 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 FMO6PO60774 539 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 FABP3P05413 133 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 CELA3BP08861 270 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 TACSTD2P09758 323 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 CECR9P0C854 216 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 GKN3PP0CG01 181 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 RAP2AP10114 183 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 GIFP27352 417 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 THBS4P35443 961 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 PPOXP50336 477 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 COPZ1P61923 177 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 NAAAQ02083 359 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 EPS8Q12929 822 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 OTUD3Q5T2D3 398 aaPredicted RBP11.94□□□□□ -0.5
DDX39A-201ENST00000242776 SHQ1Q6PI26 577 aaKnown RBP11.94□□□□□ -0.5
DDX39A-201ENST00000242776 GRINAQ7Z429 371 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 GPAT4Q86UL3 456 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 FAM86B1Q8N7N1 296 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 UBASH3BQ8TF42 649 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 STMN2Q93045 179 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 RPS6KB2Q9UBS0 482 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
DDX39A-201ENST00000242776 FAM32AQ9Y421 112 aaKnown RBP11.94□□□□□ -0.5
DDX39A-201ENST00000242776 MGAM2Q2M2H8 2515 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 TMEM229AB2RXF0 380 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 FAAHO00519 579 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 FRS3O43559 492 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 AKR7A3O95154 331 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 SEMG1P04279 462 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ERCC1P07992 297 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ADRA2AP08913 450 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 TNFRSF1BP20333 461 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 OR1E2P47887 323 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ERFP50548 548 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-201ENST00000242776 SLC35A1P78382 337 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 IL1RL1Q01638 556 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 PLAURQ03405 335 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 SLC17A1Q14916 467 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ZFP1Q6P2D0 407 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ANKRD16Q6P6B7 361 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 DEF8Q6ZN54 512 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 MYPOPQ86VE0 399 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-201ENST00000242776 GLCCI1Q86VQ1 547 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 COMTD1Q86VU5 262 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ZDHHC21Q8IVQ6 265 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 CDK20Q8IZL9 346 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 TMEM99Q8N816 258 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 OR6T1Q8NGN1 323 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 OR1K1Q8NGR3 316 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 HPS1Q92902 700 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ZMYND19Q96E35 227 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-201ENST00000242776 ALKBH3Q96Q83 286 aaPredicted RBP11.93□□□□□ -0.5
DDX39A-201ENST00000242776 MCHR1Q99705 422 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms