RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ACOT7O00154 380 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 RRP8O43159 456 aaKnown RBP16.58■□□□□ 0.25
SNX17-201ENST00000233575 EIF1BO60739 113 aaKnown RBP16.58■□□□□ 0.25
SNX17-201ENST00000233575 CTLA4P16410 223 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 AGFG1P52594 562 aaKnown RBP16.58■□□□□ 0.25
SNX17-201ENST00000233575 FMODQ06828 376 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 OTPQ5XKR4 325 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 CLVS1Q8IUQ0 354 aaPredicted RBP16.58■□□□□ 0.25
SNX17-201ENST00000233575 ZADH2Q8N4Q0 377 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 RFLNBQ8N5W9 214 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 NANOGP1Q8N7R0 232 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 ROBO4Q8WZ75 1007 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 ZDHHC11Q9H8X9 412 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 ACKR4Q9NPB9 350 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 QPCTLQ9NXS2 382 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 VSX1Q9NZR4 365 aaPredicted RBP16.58■□□□□ 0.25
SNX17-201ENST00000233575 PCDHGA9Q9Y5G4 932 aaKnown RBP16.58■□□□□ 0.25
SNX17-201ENST00000233575 NCOR2Q9Y618 2525 aa16.58■□□□□ 0.25
SNX17-201ENST00000233575 NPIPB13A6NJU9 1138 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 C12orf71A8MTZ7 269 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 NPIPB4C9JG80 1138 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 M0R3G1 203 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 SELENOFO60613 162 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 GLCEO94923 617 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 HSMCR30P0CW71 290 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 ZNF43P17038 809 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 MYL12AP19105 171 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 LGALS3BPQ08380 585 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 TMED1Q13445 227 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 C3AR1Q16581 482 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 EEF1A1P5Q5VTE0 462 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 RNLSQ5VYX0 342 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 IGFL3Q6UXB1 125 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 OR10H4Q8NGA5 316 aa16.58■□□□□ 0.24
SNX17-201ENST00000233575 IGKV1D-43A0A0B4J1Z2 117 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 LINC01387J3KSC0 135 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 TRMUO75648 421 aaKnown RBP16.57■□□□□ 0.24
SNX17-201ENST00000233575 ZNF708P17019 499 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 LIPAP38571 399 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 CAMK2DQ13557 499 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 C1DQ13901 141 aaKnown RBP16.57■□□□□ 0.24
SNX17-201ENST00000233575 GGTLC2Q14390 218 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 TIGD6Q17RP2 521 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 SLC35D3Q5M8T2 416 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 BORAQ6PGQ7 559 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 OR2T4Q8NH00 348 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 FCGR1BQ92637 280 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 ABTB1Q969K4 478 aaPredicted RBP16.57■□□□□ 0.24
SNX17-201ENST00000233575 KCNK17Q96T54 332 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 TTTY10Q9BZA0 68 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 ERVK13-1Q9NX77 482 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 B9D1Q9UPM9 204 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 RASD1Q9Y272 281 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 CACNA1GO43497 2377 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 SLC35F4A4IF30 521 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 TVP23AA6NH52 213 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 MYL12BO14950 172 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 SLC16A7O60669 478 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 ZNF24P17028 368 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 CRELD1Q96HD1 420 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 ZNF385AQ96PM9 386 aaKnown RBP16.57■□□□□ 0.24
SNX17-201ENST00000233575 TIMP4Q99727 224 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 NAA11Q9BSU3 229 aaPredicted RBP16.57■□□□□ 0.24
SNX17-201ENST00000233575 MND1Q9BWT6 205 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 LDAHQ9H6V9 325 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 NDUFA13Q9P0J0 144 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 SPRR3Q9UBC9 169 aa16.57■□□□□ 0.24
SNX17-201ENST00000233575 EXOSC1Q9Y3B2 195 aaKnown RBP16.57■□□□□ 0.24
SNX17-201ENST00000233575 PTPRQQ9UMZ3 2332 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 LOC102725191A0A1B0GVB3 256 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 A6NIZ1 184 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 TFECO14948 347 aaPredicted RBP16.56■□□□□ 0.24
SNX17-201ENST00000233575 NR4A1P22736 598 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 RAP1BP61224 184 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 RAP1AP62834 184 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 SLC17A1Q14916 467 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 ZNF169Q14929 603 aaPredicted RBP16.56■□□□□ 0.24
SNX17-201ENST00000233575 LCN1P1Q5VSP4 162 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 CARD17Q5XLA6 110 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 SSX6Q7RTT6 188 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 ZNF367Q7RTV3 350 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 ZBTB46Q86UZ6 589 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 ACBD7Q8N6N7 88 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 NEIL3Q8TAT5 605 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 TM9SF4Q92544 642 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 EXTL1Q92935 676 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 ZNF775Q96BV0 537 aaPredicted RBP16.56■□□□□ 0.24
SNX17-201ENST00000233575 SNX18Q96RF0 628 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 TAAR6Q96RI8 345 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 CNN2Q99439 309 aaKnown RBP16.56■□□□□ 0.24
SNX17-201ENST00000233575 FUNDC2Q9BWH2 189 aa16.56■□□□□ 0.24
SNX17-201ENST00000233575 IGLV1-36A0A0B4J1U3 117 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 C1QTNF9BB2RNN3 333 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 ZNHIT1O43257 154 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 C1QTNF9P0C862 333 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 CLDN17P56750 224 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 ZNF85Q03923 595 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 SPHARQ15513 63 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 ARMCX4Q5H9R4 360 aa16.55■□□□□ 0.24
SNX17-201ENST00000233575 CREB3L2Q70SY1 520 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms