RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CLDN22Q8N7P3 220 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 KBTBD8Q8NFY9 601 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 OR13C2Q8NGS9 318 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 MAGEE2Q8TD90 523 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-201ENST00000230480 ASB10Q8WXI3 467 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 HTRA1Q92743 480 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 HDAC2Q92769 488 aaKnown RBP11.98□□□□□ -0.49
VEGFA-201ENST00000230480 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 NSMCE2Q96MF7 247 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 USB1Q9BQ65 265 aaKnown RBP11.98□□□□□ -0.49
VEGFA-201ENST00000230480 FAM192AQ9GZU8 254 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 ANKRD19PQ9H560 264 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 IL1RAPQ9NPH3 570 aa11.98□□□□□ -0.49
VEGFA-201ENST00000230480 PAPOLBQ9NRJ5 636 aaKnown RBP11.98□□□□□ -0.49
VEGFA-201ENST00000230480 CRNNQ9UBG3 495 aaPredicted RBP11.98□□□□□ -0.49
VEGFA-201ENST00000230480 SAMD4AQ9UPU9 718 aaKnown RBP11.98□□□□□ -0.49
VEGFA-201ENST00000230480 TRAV27A0A087WT01 109 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 A0A096LPE4 126 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 ARPC4-TTLL3A0A0A6YYG9 625 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 A0A1W2PPZ6 126 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 SH3PXD2BA1X283 911 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 IMPA2O14732 288 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 CLOCKO15516 846 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 SLC43A1O75387 559 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 TRMUO75648 421 aaKnown RBP11.97□□□□□ -0.49
VEGFA-201ENST00000230480 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 CD8AP01732 235 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 H1F0P07305 194 aaKnown RBP11.97□□□□□ -0.49
VEGFA-201ENST00000230480 CELA3BP08861 270 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 CD40P25942 277 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 GPR4P46093 362 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 ZNF83P51522 516 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 HMGA2P52926 109 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 PGGHGQ32M88 737 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 OR7E24Q6IFN5 339 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 ARHGAP24Q8N264 748 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 C17orf78Q8N4C9 275 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 OR4C15Q8NGM1 316 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 OR51A7Q8NH64 312 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 NINJ1Q92982 152 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 ITFG2Q969R8 447 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 ZNF347Q96SE7 839 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 PIP5K1AQ99755 562 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 CADM1Q9BY67 442 aaKnown RBP11.97□□□□□ -0.49
VEGFA-201ENST00000230480 DCLRE1BQ9H816 532 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 NDE1Q9NXR1 346 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 SIGLEC7Q9Y286 467 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 LRCH1Q9Y2L9 728 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 UGT2A1Q9Y4X1 527 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 CHD3Q12873 2000 aaKnown RBP11.97□□□□□ -0.49
VEGFA-201ENST00000230480 ZANQ9Y493 2812 aa11.97□□□□□ -0.49
VEGFA-201ENST00000230480 IGHV1-18A0A0C4DH31 117 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 OR6C65A6NJZ3 312 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 MCIDASD6RGH6 385 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 E7EQL1 145 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ZNF587BE7ETH6 402 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 RNF13O43567 381 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 IGHMP01871 453 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 SOD3P08294 240 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 VHLP40337 213 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 DBPQ10586 325 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ZNF770Q6IQ21 691 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ANKRD16Q6P6B7 361 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 FAM122BQ7Z309 247 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 NANOGNBQ7Z5D8 188 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 IGFN1Q86VF2 1251 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ADGRG5Q8IZF4 528 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 OR4K5Q8NGD3 323 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 OR52J3Q8NH60 311 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ZNF519Q8TB69 540 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 DNAJC9Q8WXX5 260 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 SLC25A44Q96H78 314 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-201ENST00000230480 FAM46AQ96IP4 442 aaKnown RBP11.96□□□□□ -0.49
VEGFA-201ENST00000230480 TSPAN32Q96QS1 320 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 KCNK17Q96T54 332 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 THTPAQ9BU02 230 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 GLTPQ9NZD2 209 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ITGB1BP2Q9UKP3 347 aa11.96□□□□□ -0.49
VEGFA-201ENST00000230480 ZNF346Q9UL40 294 aaKnown RBP11.96□□□□□ -0.49
VEGFA-201ENST00000230480 PRPF19Q9UMS4 504 aaKnown RBP11.96□□□□□ -0.49
VEGFA-201ENST00000230480 HTR3EA5X5Y0 456 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 NPIPB13A6NJU9 1138 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF99A8MXY4 864 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-201ENST00000230480 NPIPB4C9JG80 1138 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 HS3ST1O14792 307 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 GSC2O15499 205 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 IGKV3-15P01624 115 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 RAF1P04049 648 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 SCG5P05408 212 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 UMPSP11172 480 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 NR1H2P55055 460 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 MYBPC1Q00872 1141 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 PPP1R8Q12972 351 aaKnown RBP11.95□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-201ENST00000230480 SLC25A47Q6Q0C1 308 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 SKA3Q8IX90 412 aa11.95□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF611Q8N823 705 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms