RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TNFRSF10AO00220 468 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 NFYBP25208 207 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 ZNF93P35789 620 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 RAD52P43351 418 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 RPL27P61353 136 aaKnown RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 KCTD12Q96CX2 325 aaKnown RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 ZNF582Q96NG8 517 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 OR52A1Q9UKL2 312 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 CCDC187A0A096LP49 1063 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 CRYAAP02489 173 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 KHDC1LQ5JSQ8 128 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 BRICD5Q6PL45 260 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 OR51D1Q8NGF3 324 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 ANKRD9Q96BM1 317 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 SLC35A4Q96G79 324 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 RTL8AQ9BWD3 113 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 C1QTNF6Q9BXI9 259 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 KCNJ16Q9NPI9 418 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 MSTNO14793 375 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 ALKBH1Q13686 389 aaKnown RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 SLC35D3Q5M8T2 416 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 SYT9Q86SS6 491 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 RBMXL3Q8N7X1 1067 aaKnown RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 BHLHE23Q8NDY6 225 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 FRZBQ92765 325 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 PIGTQ969N2 578 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 WBP2Q969T9 261 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 CNTNAP3BQ96NU0 1288 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 NWD2Q9ULI1 1742 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 SNRPD2P62316 118 aaKnown RBP17.42■□□□□ 0.38
SMPD3-201ENST00000219334 DYRK1AQ13627 763 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 FAM71CQ8NEG0 241 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 FGGYQ96C11 551 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 RCE1Q9Y256 329 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 PIGLQ9Y2B2 252 aa17.42■□□□□ 0.38
SMPD3-201ENST00000219334 F8W036 122 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 MAP2K6P52564 334 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 CCL4L1Q8NHW4 92 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 EMG1Q92979 244 aaKnown RBP17.41■□□□□ 0.38
SMPD3-201ENST00000219334 CRLF2Q9HC73 371 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 ALPLP05186 524 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 AKR1C1Q04828 323 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 HEPHL1Q6MZM0 1159 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 CD300LGQ6UXG3 332 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 PIWIL3Q7Z3Z3 882 aaKnown RBP17.41■□□□□ 0.38
SMPD3-201ENST00000219334 ABHD6Q9BV23 337 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 HES7Q9BYE0 225 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 SLC22A23A1A5C7 686 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 OR6C65A6NJZ3 312 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 ZNF701M0R085 212 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-201ENST00000219334 HTR1FP30939 366 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 PPICP45877 212 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 SMN1Q16637 294 aaKnown RBP17.41■□□□□ 0.38
SMPD3-201ENST00000219334 RNLSQ5VYX0 342 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 SLC22A25Q6T423 547 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 APOOLQ6UXV4 268 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 KDM8Q8N371 416 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 RASD2Q96D21 266 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 RNF170Q96K19 258 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 CHST11Q9NPF2 352 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 COA3Q9Y2R0 106 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-201ENST00000219334 GLCEO94923 617 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 DAPP51397 102 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 SELENBP1Q13228 472 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 GALEQ14376 348 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 WWTR1Q9GZV5 400 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 USP22Q9UPT9 525 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 PCDHGA5Q9Y5G8 931 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 HRH3Q9Y5N1 445 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 RGPD5Q99666 1765 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 M0R082 166 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 HLA-BQ31612 363 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 WFDC8Q8IUA0 241 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 C19orf12Q9NSK7 152 aa17.41■□□□□ 0.38
SMPD3-201ENST00000219334 GABARAPH6UMI1 98 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 AGPAT2O15120 278 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CSO75390 466 aaKnown RBP17.4■□□□□ 0.38
SMPD3-201ENST00000219334 GABARAPO95166 117 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CLDN12P56749 244 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 SRPXP78539 464 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 MFGE8Q08431 387 aaPredicted RBP17.4■□□□□ 0.38
SMPD3-201ENST00000219334 OR8G1Q15617 311 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CAMKMTQ7Z624 323 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 Q96M85 177 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 GFYI3L273 518 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 RFPL3O75679 317 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 TGM4P49221 684 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 DEDD2Q8WXF8 326 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 A0A1W2PR48 441 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A6P0DMU7 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A5P0DMU8 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A7P0DMV0 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A8P0DMV1 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A9P0DMV2 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 DEFA4P12838 97 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 TEAD1P28347 426 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A2Q5DJT8 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A1Q5HYN5 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 BCORP1Q8N888 145 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 NKAIN3Q8N8D7 197 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms