RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Zfp362B1ASA5 418 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Mn1D3YWE6 1297 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Wscd2D4PHA7 571 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 C2cd4dP0CG09 341 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 StsP50427 624 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hcrtr2P58308 460 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tigd2Q0VBL1 525 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Rnf133Q14B02 382 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tssk1bQ61241 365 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 HlxQ61670 476 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Rhbdd3Q8BP97 385 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Mnd1Q8K396 205 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 RbksQ8R1Q9 323 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr1284Q8VF29 311 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Frs3Q91WJ0 492 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tspan31Q9CQ88 210 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tex47Q9D5W8 253 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Trappc4Q9ES56 219 aa20.55■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Sptbn4E9PX29 2561 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ankrd12G5E893 2041 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Lsm3P62311 102 aaKnown RBP20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hoxd1Q01822 328 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Arhgef39Q66JY6 344 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Lkaaear1Q8BIG2 198 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ncs1Q8BNY6 190 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 UstQ8BUB6 407 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Acot4Q8BWN8 421 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Noxa1Q8CJ00 444 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hmg20aQ9DC33 346 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Bco1Q9JJS6 566 aa20.54■□□□□ 0.88
Scn1b-201ENSMUST00000098548 TrdcA0A0G2JEU3 153 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr1097A2AVA9 315 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Zfp945E9PYM8 794 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr294F7CWV4 335 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Sox6P40645 827 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 EbpP70245 230 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 UbqlnlQ14DL0 610 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Pif1Q80SX8 650 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tmem200aQ8C817 491 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr341Q8VGK9 313 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Rad51cQ924H5 366 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Tmem179bQ9CY24 219 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 P2ry4Q9JJS7 361 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ldb3Q9JKS4 723 aaKnown RBP20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Bloc1s6Q9R0C0 172 aa20.53■□□□□ 0.88
Scn1b-201ENSMUST00000098548 TprF6ZDS4 2431 aaKnown RBP20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ighv15-2A0A0A6YX72 118 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2abC0HKE1 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2acC0HKE2 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2adC0HKE3 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2aeC0HKE4 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2agC0HKE5 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2aiC0HKE6 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2anC0HKE7 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2aoC0HKE8 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2apC0HKE9 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Gm10340K7N708 205 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Ctla2aP12399 137 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Klk1b5P15945 261 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Rab12P35283 243 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Actc1P68033 377 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Acta1P68134 377 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 CpeQ00493 476 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Zrsr1Q64707 428 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Npr2Q6VVW5 1047 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Zfp954Q7TNU5 416 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr967Q7TRA6 310 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Zfp184Q7TSH9 737 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Impad1Q80V26 356 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist3h2aQ8BFU2 130 aaKnown RBP20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Mettl27Q8BGM4 238 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2afQ8CGP5 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2ahQ8CGP6 128 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Hist1h2akQ8CGP7 130 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Zbtb20Q8K0L9 741 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Plac9Q8K262 108 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 H2afjQ8R1M2 129 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr461Q8VF30 313 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Olfr771Q8VFH6 317 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Thumpd1Q99J36 350 aaKnown RBP20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 NansQ99J77 359 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Smim23Q9DAL0 136 aa20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Phf3B2RQG2 2025 aaKnown RBP20.52■□□□□ 0.88
Scn1b-201ENSMUST00000098548 Gm28557A0A087WQQ0 336 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 A0A1W2P799 418 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Sac3d1A6H687 427 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gm8973D3YX71 104 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rdh8D3Z6W3 317 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Obox6G3X9U1 347 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Klk1b1P00755 261 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Etv1P41164 477 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Slc1a3P56564 543 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 D13Ertd608eQ3UPR8 151 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Nlrc3Q5DU56 1064 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Mettl7a2Q5I0W6 244 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Sgk494Q5SYL1 278 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Orm1Q60590 207 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Katnb1Q8BG40 658 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Adprhl1Q8BGK2 353 aa20.51■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfml2aQ8BHP7 681 aa20.51■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms