RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Fgf3P05524 245 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc25a32Q8BMG8 316 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1394Q8VET2 312 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mrpl3Q99N95 348 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Msmo1Q9CRA4 293 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 RlimQ9WTV7 600 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Scn7aB1AYL1 1681 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm5901D3YVJ1 333 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tex264E9Q137 309 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 GzmmO08643 264 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc30a10Q3UVU3 470 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Patz1Q5NBY9 687 aaKnown RBP11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Six4Q61321 775 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Defb14Q7TNV9 67 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1290Q7TQX8 312 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cpne4Q8BLR2 557 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lrfn5Q8BXA0 719 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r48Q9EQ52 302 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Apc2Q9Z1K7 2274 aa11.15□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn2r82G3UWA2 865 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Emc8O70378 207 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Casd1Q7TN73 797 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ccdc115Q8VE99 180 aaKnown RBP11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr168Q8VF05 312 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr291Q8VF60 317 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1501Q8VFQ3 315 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gdpd1Q9CRY7 314 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pebp4Q9D9G2 242 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r53Q9EP93 310 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cln8Q9QUK3 288 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm13539A0A1B0GSM6 183 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn2r108E9PYS0 855 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp169E9Q3R6 731 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd1d1P11609 336 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd1d2P11610 336 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 RelP15307 587 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cuzd1P70412 606 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zar1Q80SU3 361 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Clrn3Q8BHH8 226 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ctdsp2Q8BX07 270 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vwc2Q8C8N3 324 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Spcs2Q9CYN2 226 aaKnown RBP11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1532-ps1A0A0R4J8U2 307 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr707K7N662 307 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Bpifa2P07743 235 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ctla4P09793 223 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Camk2aP11798 478 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Il11ra2P70225 432 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Kcnc3Q63959 769 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Thap7Q8VCZ3 309 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Syt17Q920M7 470 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Aqp9Q9JJJ3 295 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmsb15aA2AEH9 79 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lao1B1ARV3 523 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Casp7P97864 303 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cass4Q08EC4 804 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Riiad1Q3KNY5 119 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lrrn4clQ3TYX2 239 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc5a7Q8BGY9 580 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 P2ry10bQ8BY68 352 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc25a46Q9CQS4 418 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fer1l6E0CZ42 1862 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd8aP01731 247 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Map2k4P47809 397 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hsd17b8P50171 259 aaKnown RBP11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lcn4Q62472 185 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Exosc6Q8BTW3 273 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Frs3Q91WJ0 492 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lmntd1Q9D4C1 413 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cela3aA2A9U8 283 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pcdh17E9PXF0 1157 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Dlx2P40764 332 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Etv1P41164 477 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc10a2P70172 348 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fbxo5Q7TSG3 421 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lrrc15Q80X72 579 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cept1Q8BGS7 416 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 GamtO35969 236 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Dmp1O55188 503 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tas2r40Q7TQB8 319 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1396Q7TQS8 315 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 C5ar2Q8BW93 344 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr870Q8VGG4 311 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1250Q8VGM3 314 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zdhhc7Q91WU6 308 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 AldobQ91Y97 364 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rpe65Q91ZQ5 533 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rnf141Q99MB7 230 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Psg23Q9D2U0 471 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Psg21Q9DAV5 471 aa11.14□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm21797J3QNW5 180 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Bcl2P10417 236 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tpi1P17751 299 aaKnown RBP11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Il12aP43431 215 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Drd4P51436 387 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cobll1Q3UMF0 1273 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cdv3Q4VAA2 281 aaKnown RBP11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Adora3Q61618 319 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Kir3dl2Q673W2 388 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1252Q7TQZ2 314 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms