RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Wfikkn1Q8R0S6 552 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr518Q8VEW1 333 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rwdd2bQ99M03 290 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc25a25A2ASZ8 469 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 4931429L15RikE9PVU2 379 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Muc3E9PWP7 378 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tacr1P30548 407 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rad52P43352 420 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ptx3P48759 381 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Osgin2Q3TEE9 550 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 1700012B07RikQ3V0S8 276 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc44a5Q5RJI2 710 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Nup62Q63850 526 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tusc1Q673H1 205 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gprin3Q8BWS5 763 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1254Q8VFB1 314 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 3110001I22RikQ9CZ70 312 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mrpl28Q9D1B9 257 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Trav1A0A075B5Z4 110 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm17026K7N6Z0 213 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn2r89O35199 507 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 H2-ObO35424 271 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rbbp9O88851 186 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kcne1P23299 129 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Crmp1P97427 572 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Acp6Q8BP40 418 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr575Q8VH16 318 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Park7Q99LX0 189 aaKnown RBP10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Nudt21Q9CQF3 227 aaKnown RBP10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Naa10Q9QY36 235 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 SncgQ9Z0F7 123 aaKnown RBP10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Trav6-7-dv9A0A075B639 125 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Igkv10-95A0A0G2JFY3 115 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm13090A2A899 111 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Adamtsl5D3Z689 485 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rnf148G3X9R7 316 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm5916G5E8W5 102 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ugt8Q64676 541 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Fbll1Q80WS3 314 aaKnown RBP10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ddhd2Q80Y98 699 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Wbp1lQ8BGW2 348 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn1r201Q8R262 300 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc7a13Q91WN3 478 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Spcs2Q9CYN2 226 aaKnown RBP10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 ArntlQ9WTL8 632 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tspoap1Q7TNF8 1846 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kcns2O35174 477 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 CgaP01216 120 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ntrk2P15209 821 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Eci1P42125 289 aaKnown RBP10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ces2fQ08ED5 561 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Calm5Q6W3E0 140 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Fam57bQ7TNV1 275 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Sez6Q7TSK2 991 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ufsp2Q99K23 461 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 S100a16Q9D708 124 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ch25hQ9Z0F5 298 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Itgb4A2A863 1818 aa10.93□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm4778L7N229 365 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 EnamO55196 1274 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 FurinP23188 793 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 GifP52787 417 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Htr1fQ02284 366 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc35f3Q1LZI2 421 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn1r11Q3SXA2 299 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 B630019K06RikQ7TNS5 333 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zfp286Q8C0E6 519 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc49a3Q8CE47 516 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr341Q8VGK9 313 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rbms1Q91W59 403 aaKnown RBP10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Pard6gQ9JK84 382 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cnih2O35089 160 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc1a3P56564 543 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 EngQ63961 653 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 RimklaQ6PFX8 380 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Naa50Q6PGB6 169 aaKnown RBP10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zfp866Q6PGD2 520 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1162Q7TR28 314 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Fbxw14Q8C2Y5 466 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kctd20Q8CDD8 419 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ebf4Q8K4J2 599 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Actl6bQ99MR0 426 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mrps18bQ99N84 254 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 NaaaQ9D7V9 362 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Pycr3Q9DCC4 274 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gpr37Q9QY42 600 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tbc1d24Q3UUG6 561 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 C130050O18RikQ497Y9 356 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Elavl2Q60899 360 aaKnown RBP10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zer1Q80ZJ6 779 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zc3h12dQ8BIY3 533 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 F830045P16RikQ8BJ95 487 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gabarapl1Q8R3R8 117 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr434Q8VF17 321 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr47Q8VF18 321 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Abhd17aQ99JW1 310 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Art4Q9CRA0 300 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Phc2Q9QWH1 850 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Aloxe3Q9WV07 711 aa10.92□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tcrg-V7A0A0A6YYE8 116 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms