RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gm13199Q8C8E0 125 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Vmn1r200Q8R281 312 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Slc7a13Q91WN3 478 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Mrgpra5Q91ZC7 304 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Taar1Q923Y8 332 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Tktl1Q99MX0 595 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 NtmQ99PJ0 344 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Slc35a4Q9D321 324 aa15.05■□□□□ 0
Shh-201ENSMUST00000002708 Ighv1-13A0A075B5I0 98 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Olfr1493-ps1A0A140LHU2 316 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Col9a3A2ACT7 680 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 AI182371A2AS37 356 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Tmem74bA2AU34 232 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Zfp712E9PXJ4 705 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Ntn1O09118 604 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Zdhhc2P59267 366 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Ube2mP61082 183 aaKnown RBP15.05■□□□□ -0
Shh-201ENSMUST00000002708 Zfp987Q32P14 633 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Ankub1Q3UUE9 192 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Lin28bQ45KJ6 247 aaKnown RBP15.05■□□□□ -0
Shh-201ENSMUST00000002708 4930512M02RikQ5SQK8 218 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Klf2Q60843 354 aaKnown RBP15.05■□□□□ -0
Shh-201ENSMUST00000002708 Lcn3Q62471 182 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Timd4Q6U7R4 343 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Q8C3I9 435 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Olfr516Q8VFZ5 314 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Prl8a6Q9DAY2 240 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Copz2Q9JHH9 205 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Ca5bQ9QZA0 317 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Sfrp5Q9WU66 314 aa15.05■□□□□ -0
Shh-201ENSMUST00000002708 Prdx6O08709 224 aaKnown RBP15.04■□□□□ -0
Shh-201ENSMUST00000002708 Galr3O88853 370 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 GcatO88986 416 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Msx1P13297 303 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 TtlP38585 377 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Pou3f4P62515 361 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 BglapP86546 95 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Bglap2P86547 95 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 ScimpQ3UU41 150 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Tmed3Q78IS1 221 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Nyap2Q8BM65 682 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Mettl21eQ8CDZ2 244 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Fbxw17Q8CFE8 466 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Olfr518Q8VEW1 333 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Clec2dQ91V08 207 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Tmem218Q9CQ44 115 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Tomm34Q9CYG7 309 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Htr6Q9R1C8 440 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 MpdzQ8VBX6 2055 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Ccr4P51680 360 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 PitpnbP53811 271 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Cdk5r1P61809 307 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 2900092C05RikQ5I0V9 184 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Serinc5Q8BHJ6 461 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 P2ry10bQ8BY68 352 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Gm10283Q8C3L5 117 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Ndc1Q8VCB1 673 aaKnown RBP15.04■□□□□ -0
Shh-201ENSMUST00000002708 Satb2Q8VI24 733 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 P2ry12Q9CPV9 347 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Uqcrc1Q9CZ13 480 aaKnown RBP15.04■□□□□ -0
Shh-201ENSMUST00000002708 Slc25a18Q9DB41 320 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Chst11Q9JME2 352 aa15.04■□□□□ -0
Shh-201ENSMUST00000002708 Pias3O54714 628 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 H2-T23P06339 357 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Lemd1Q14C37 129 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Pdp1Q3UV70 538 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Slc30a10Q3UVU3 470 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Dnaaf3Q3UYV8 586 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Fbxw16Q497Z0 464 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Dag1Q62165 893 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Nudt15Q8BG93 170 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 RybpQ8CCI5 228 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Apbb3Q8R1C9 486 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Olfr1079Q8VF52 315 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Olfr651Q8VG78 313 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Cdc42ep1Q91W92 409 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Elovl6Q920L5 267 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Vmn1r53Q9EP93 310 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Raet1dQ9JI58 249 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Klhl1Q9JI74 751 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Six6Q9QZ28 246 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Nckap5E9QAE1 1909 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Pi4kaE9Q3L2 2105 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Dchs2A0A0A6YW72 3346 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Tox2A2A472 547 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Olfr1338A2ACY7 313 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Gm15446D3Z5Y8 553 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Ifi203O35368 408 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Khdc4Q3TCX3 612 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Rnase12Q5GAM8 145 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Ppp5cQ60676 499 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Dio1Q61153 257 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Ift52Q62559 426 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Nup62Q63850 526 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Rps27Q6ZWU9 84 aaKnown RBP15.03■□□□□ -0
Shh-201ENSMUST00000002708 Agfg2Q80WC7 479 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Slitrk2Q810C0 846 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Ankmy1Q8C0W1 906 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Fam199xQ8K2D0 388 aa15.03■□□□□ -0
Shh-201ENSMUST00000002708 Lrg1Q91XL1 342 aa15.03■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms