RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CD53P19397 219 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 GALP22466 123 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 CD82P27701 267 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 TLE3Q04726 772 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 OXA1LQ15070 435 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 KCNJ8Q15842 424 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 C6orf183Q5T699 404 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 OR6Q1Q8NGQ2 317 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 ZNF519Q8TB69 540 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 TRMT61AQ96FX7 289 aaKnown RBP14.8□□□□□ -0.04
PHGDH-216ENST00000641375 KCTD7Q96MP8 289 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 NXF2Q9GZY0 626 aaKnown RBP14.8□□□□□ -0.04
PHGDH-216ENST00000641375 IRF2BPLQ9H1B7 796 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 SYT4Q9H2B2 425 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 SRA1Q9HD15 236 aaKnown RBP14.8□□□□□ -0.04
PHGDH-216ENST00000641375 SACM1LQ9NTJ5 587 aa14.8□□□□□ -0.04
PHGDH-216ENST00000641375 EP300Q09472 2414 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-216ENST00000641375 TRDV1A0A1B0GX56 115 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 PRSS37A4D1T9 235 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 J3QLW9 94 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 P04436 131 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 LIFP15018 202 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 ZNF19P17023 458 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 IL11P20809 199 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 DPP4P27487 766 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 PYCR1P32322 319 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 NBL1P41271 181 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 CENPAP49450 140 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 MYBPHQ13203 477 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 TRIM16LQ309B1 348 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 ZNF468Q5VIY5 522 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-216ENST00000641375 EEF1A1P5Q5VTE0 462 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 VASH1Q7L8A9 365 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-216ENST00000641375 TMPRSS12Q86WS5 348 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 OR6V1Q8N148 313 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 GTPBP8Q8N3Z3 284 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-216ENST00000641375 TSSK2Q96PF2 358 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 TM9SF2Q99805 663 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 MROQ9BYG7 248 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 FANCFQ9NPI8 374 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 TEKT2Q9UIF3 430 aa14.79□□□□□ -0.04
PHGDH-216ENST00000641375 PCSK5Q92824 1860 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 CLDN25C9JDP6 229 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 MS4A18H0YCH9 400 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 H7C1C5 153 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 SELENOFO60613 162 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 CBR3O75828 277 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 OPRL1P41146 370 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 DAP3P51398 398 aaKnown RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 OR12D2P58182 307 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 LCN6P62502 163 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 MS4A18Q3C1V0 323 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 GLYR1Q49A26 553 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 CDONQ4KMG0 1287 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 B3GNTL1Q67FW5 361 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 TIGD3Q6B0B8 471 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 SLC16A9Q7RTY1 509 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 PM20D2Q8IYS1 436 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 IL22RA1Q8N6P7 574 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 ADAMTS17Q8TE56 1095 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 SMAP2Q8WU79 429 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 SNX33Q8WV41 574 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 THAP4Q8WY91 577 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 THOC3Q96J01 351 aaKnown RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 CDADC1Q9BWV3 514 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 WDR12Q9GZL7 423 aaKnown RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 VSX1Q9NZR4 365 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 ZMIZ1Q9ULJ6 1067 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 HDGFL3Q9Y3E1 203 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 FKBP7Q9Y680 259 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 DOCK10Q96BY6 2186 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 A6NIZ1 184 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 PLPP2O43688 288 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 IL1AP01583 271 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 CYB561P49447 251 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 BLVRAP53004 296 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 RAP1BP61224 184 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 RAP1AP62834 184 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 FABP5Q01469 135 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 TRAM1Q15629 374 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 FAM205BPQ63HN1 556 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 C22orf42Q6IC83 251 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 SSX6Q7RTT6 188 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 MDGA2Q7Z553 956 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 PXKQ7Z7A4 578 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 ADPRHL1Q8NDY3 354 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 RELTQ969Z4 430 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 C5orf34Q96MH7 638 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 GNRHR2Q96P88 292 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 MNTQ99583 582 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 TMED9Q9BVK6 235 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 RERGLQ9H628 205 aa14.78□□□□□ -0.04
PHGDH-216ENST00000641375 MRPS18BQ9Y676 258 aaKnown RBP14.78□□□□□ -0.04
PHGDH-216ENST00000641375 SPAARA0A1B0GVQ0 90 aa14.77□□□□□ -0.04
PHGDH-216ENST00000641375 A0A1W2PNV4 684 aa14.77□□□□□ -0.04
PHGDH-216ENST00000641375 FAM171A2A8MVW0 826 aa14.77□□□□□ -0.04
PHGDH-216ENST00000641375 DCTN6O00399 190 aa14.77□□□□□ -0.04
PHGDH-216ENST00000641375 GAAP10253 952 aa14.77□□□□□ -0.04
PHGDH-216ENST00000641375 TCEA1P23193 301 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms