RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 CCDC86Q9H6F5 360 aaKnown RBP9.37□□□□□ -0.91
NECAP1-223ENST00000640091 WARS2Q9UGM6 360 aaKnown RBP9.37□□□□□ -0.91
NECAP1-223ENST00000640091 DIMT1Q9UNQ2 313 aaKnown RBP9.37□□□□□ -0.91
NECAP1-223ENST00000640091 CEPT1Q9Y6K0 416 aa9.37□□□□□ -0.91
NECAP1-223ENST00000640091 SLC22A31A6NKX4 558 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 NPIPA5E9PKD4 350 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 K7EM74 188 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 GLSO94925 669 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 PMS2P2O95744 297 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 GPANK1O95872 356 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 POU3F2P20265 443 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 CARD18P57730 90 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 PON3Q15166 354 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 EMC4Q5J8M3 183 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 ARMC4Q5T2S8 1044 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 CLVS1Q8IUQ0 354 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 OR13F1Q8NGS4 319 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 FOXN4Q96NZ1 517 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 TSC22D3Q99576 134 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 SMAD5Q99717 465 aaKnown RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 SRXN1Q9BYN0 137 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 NMNAT2Q9BZQ4 307 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 NAA50Q9GZZ1 169 aaKnown RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 TSPAN10Q9H1Z9 355 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 NPIPA1Q9UND3 350 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 ERGIC3Q9Y282 383 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 EXOGQ9Y2C4 368 aaKnown RBP9.36□□□□□ -0.91
NECAP1-223ENST00000640091 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
NECAP1-223ENST00000640091 ATMQ13315 3056 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 SMIM31A0A1B0GVY4 71 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 PRSS37A4D1T9 235 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 GJE1A6NN92 205 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 SEC14L2O76054 403 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 WISP2O76076 250 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 PDGFAP04085 211 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 NR4A1P22736 598 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 CD79BP40259 229 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 EIF1AXP47813 144 aaKnown RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 H3F3AP84243 136 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 SLC10A1Q14973 349 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 TBCEQ15813 527 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ETFDHQ16134 617 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 SYT6Q5T7P8 510 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 OR2G6Q5TZ20 316 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 HBMQ6B0K9 141 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 PLXDC2Q6UX71 529 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ZNF511Q8NB15 262 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ZNF519Q8TB69 540 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ZNF775Q96BV0 537 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 RBM38Q9H0Z9 239 aaKnown RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ADGRL4Q9HBW9 690 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 FGF20Q9NP95 211 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 AQP7P3A6NL99 342 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 C12orf71A8MTZ7 269 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 J3QRE1 110 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 CXCL13O43927 109 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 RENP00797 406 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 SBK2P0C263 348 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 LIMS3P0CW19 117 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 LIMS4P0CW20 117 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ZNF43P17038 809 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 MYL12AP19105 171 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 NAA10P41227 235 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ID4P47928 161 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 BIDP55957 195 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 CSNK2A1P68400 391 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 C1DQ13901 141 aaKnown RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 TIGD6Q17RP2 521 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 LINC01590Q5TEZ4 76 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 UBE2UQ5VVX9 321 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 NHLRC1Q6VVB1 395 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 TRILQ7L0X0 811 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 SLC22A16Q86VW1 577 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 UEVLDQ8IX04 471 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 NANOGP1Q8N7R0 232 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 EXD3Q8N9H8 876 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 PROKR2Q8NFJ6 384 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 OR10H4Q8NGA5 316 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 OR10D3Q8NH80 312 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ASB10Q8WXI3 467 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 GATAD2BQ8WXI9 593 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ROBO4Q8WZ75 1007 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ZNF845Q96IR2 970 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-223ENST00000640091 TUBA1CQ9BQE3 449 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 ALG12Q9BV10 488 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 FAM192AQ9GZU8 254 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 LIPGQ9Y5X9 500 aa9.35□□□□□ -0.91
NECAP1-223ENST00000640091 A0A1W2PNV4 684 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 SLC22A23A1A5C7 686 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 SELENOFO60613 162 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 SLC16A7O60669 478 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 LIPAP38571 399 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 CENPAP49450 140 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 RAC3P60763 192 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 FMODQ06828 376 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 CAMK2DQ13557 499 aa9.34□□□□□ -0.91
NECAP1-223ENST00000640091 HYAL4Q2M3T9 481 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms