RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 WISP1O95388 367 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 NUDT14O95848 222 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 KRT8P05787 483 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 KLK3P07288 261 aaPredicted RBP13.65□□□□□ -0.22
TRIM3-215ENST00000639856 CCKBRP32239 447 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 EVI2BP34910 448 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 INPP1P49441 399 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 FBXW4P57775 412 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 SLC26A5P58743 744 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 QPRTQ15274 297 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 MESTQ5EB52 335 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 UNQ9370/PRO34162Q6UXP9 181 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 OR14A2Q96R54 314 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 ZCCHC4Q9H5U6 513 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 HMX3A6NHT5 357 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 DCTN6O00399 190 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 BGLAPP02818 100 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 UMODP07911 640 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 FAM157BP0CG42 384 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 GRPRP30550 384 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 PITPNBP48739 271 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 GPR139Q6DWJ6 353 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 NAXDQ8IW45 347 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 PHYHIPQ92561 330 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 TSPAN32Q96QS1 320 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 CMKLR1Q99788 373 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 WDR54Q9H977 334 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 SRA1Q9HD15 236 aaKnown RBP13.64□□□□□ -0.23
TRIM3-215ENST00000639856 GPN3Q9UHW5 284 aaPredicted RBP13.64□□□□□ -0.23
TRIM3-215ENST00000639856 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
TRIM3-215ENST00000639856 TRAV36DV7A0A075B6V5 113 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 PRR32B1ATL7 298 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 ADAM10O14672 748 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
TRIM3-215ENST00000639856 FADS1O60427 444 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 EPXP11678 715 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 PSKH1P11801 424 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 GP1BBP13224 206 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 CBFBQ13951 182 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 CEP78Q5JTW2 689 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 SLC6A19Q695T7 634 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 POMZP3Q6PJE2 187 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 KCTD20Q7Z5Y7 419 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 TIGD4Q8IY51 512 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 OR2T4Q8NH00 348 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 NUBPLQ8TB37 319 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 MOV10Q9HCE1 1003 aaKnown RBP13.64□□□□□ -0.23
TRIM3-215ENST00000639856 PTRH2Q9Y3E5 179 aaKnown RBP13.64□□□□□ -0.23
TRIM3-215ENST00000639856 LOXL2Q9Y4K0 774 aa13.64□□□□□ -0.23
TRIM3-215ENST00000639856 A0A0B4J293 547 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 OR6C70A6NIJ9 312 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 PSMD9O00233 223 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 FZD7O75084 574 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 SLC25A12O75746 678 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 KLF7O75840 302 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ATF1P18846 271 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 DDOSTP39656 456 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 P2RX1P51575 399 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 NKX2-5P52952 324 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 HSD17B12Q53GQ0 312 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ATAD3CQ5T2N8 411 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ZNF57Q68EA5 555 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 SYT9Q86SS6 491 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 RNF166Q96A37 237 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ST6GAL2Q96JF0 529 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 TMEM165Q9HC07 324 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 NEK6Q9HC98 313 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 TAS2R5Q9NYW4 299 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ABRACLQ9P1F3 81 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 C19orf25Q9UFG5 118 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 FAM240BA0A1B0GVZ2 78 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 TMEM72A0PK05 275 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ZNF879B4DU55 563 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 B4E171 279 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 H7C1C5 153 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 RENP00797 406 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 MT-ATP6P00846 226 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 CELA2AP08217 269 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 TACSTD2P09758 323 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 TSPAN7P41732 249 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 NANOS3P60323 173 aaKnown RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 LCN6P62502 163 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 C1QL3Q5VWW1 255 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 PYHIN1Q6K0P9 492 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 NCCRP1Q6ZVX7 275 aaPredicted RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 OR6V1Q8N148 313 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 TRIM63Q969Q1 353 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ADAD1Q96M93 576 aaKnown RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 WACQ9BTA9 647 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 HDHD2Q9H0R4 259 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 NLKQ9UBE8 527 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 NXT1Q9UKK6 140 aaKnown RBP13.63□□□□□ -0.23
TRIM3-215ENST00000639856 ZNF281Q9Y2X9 895 aa13.63□□□□□ -0.23
TRIM3-215ENST00000639856 OTOGLQ3ZCN5 2332 aa13.62□□□□□ -0.23
TRIM3-215ENST00000639856 ZFPL1O95159 310 aa13.62□□□□□ -0.23
TRIM3-215ENST00000639856 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms