RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TMEM217Q8N7C4 229 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NANOGP1Q8N7R0 232 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ZSCAN4Q8NAM6 433 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 GJC3Q8NFK1 279 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR2M7Q8NG81 312 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR10V1Q8NGI7 309 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR1J2Q8NGS2 313 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR4L1Q8NH43 312 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR2AE1Q8NHA4 323 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ZNF398Q8TD17 642 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 CD200R1Q8TD46 325 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TMEM37Q8WXS4 190 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TMEM234Q8WY98 164 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 MYLPFQ96A32 169 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 C18orf25Q96B23 403 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 FBXL8Q96CD0 374 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NUS1Q96E22 293 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TIMD4Q96H15 378 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SLC45A3Q96JT2 553 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 ZNF582Q96NG8 517 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 PHB2Q99623 299 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 GFI1Q99684 422 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SLC6A7Q99884 636 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NEURL2Q9BR09 285 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 DPCDQ9BVM2 203 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 ACTR6Q9GZN1 396 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NAA50Q9GZZ1 169 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 CHRNA10Q9GZZ6 450 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 LHPPQ9H008 270 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NAT10Q9H0A0 1025 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 MAGIXQ9H6Y5 334 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SFXN1Q9H9B4 322 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TMEM27Q9HBJ8 222 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NMRAL1Q9HBL8 299 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SLC52A3Q9NQ40 469 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 DCAF13Q9NV06 445 aaKnown RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 PAK1IP1Q9NWT1 392 aaPredicted RBP2.67□□□□□ -1.98
VIM-210ENST00000637053 C1orf123Q9NWV4 160 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 GHRLQ9UBU3 117 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SEC14L4Q9UDX3 406 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 OR14J1Q9UGF5 321 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 SLC7A11Q9UPY5 501 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 RNF6Q9Y252 685 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 B3GNT3Q9Y2A9 372 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 NME7Q9Y5B8 376 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 C9orf84Q5VXU9 1444 aa2.67□□□□□ -1.98
VIM-210ENST00000637053 TAF1LQ8IZX4 1826 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CCDC7Q96M83 1385 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 KIR2DL5BA0A0G2JN68 375 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 KIR2DL5BA0A0G2JPC4 375 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 A0A0U1RQF3 1178 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FAM92AA1XBS5 289 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FAM172BPA6NC97 362 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 TVP23AA6NH52 213 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CASTOR2A6NHX0 329 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FTCDNL1E5RQL4 147 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 H0YL77 283 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 H3BTX0 84 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 J3QLI3 93 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SIRPB1O00241 398 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SYT7O43581 403 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PSTPIP1O43586 416 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CTSVO60911 334 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 DIRAS1O95057 198 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 HPP00738 406 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 JCHAINP01591 159 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 HLA-AP01891 365 aaKnown RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 BCHEP06276 602 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RHOCP08134 193 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 WNT2P09544 360 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 C8orf88P0DMB2 117 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CT45A8P0DMV1 189 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CT45A9P0DMV2 189 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 AKR1C4P17516 323 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SRD5A1P18405 259 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CELP19835 753 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SERPINA2P20848 420 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 IDSP22304 550 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ANOS1P23352 680 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PSMA1P25786 263 aaKnown RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 GDF1P27539 372 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 GJB2P29033 226 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 HSPA9P38646 679 aaKnown RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 CEACAM6P40199 344 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 HTR5AP47898 357 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CX3CR1P49238 355 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RAB7AP51149 207 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FUT6P51993 359 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CLDN12P56749 244 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CLRN1P58418 232 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR2B8PP59922 312 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RAB2AP61019 212 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RHOAP61586 193 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RPL32P62910 135 aaKnown RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 MS4A2Q01362 244 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PRPSAP1Q14558 356 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 UBXN2BQ14CS0 331 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SPHARQ15513 63 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 GRK1Q15835 563 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 890 ms