RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 LPAR4Q99677 370 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 GRHPRQ9UBQ7 328 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 ICAM5Q9UMF0 924 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 FOXJ3Q9UPW0 622 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 BAIAP2Q9UQB8 552 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 ZNF337Q9Y3M9 751 aa12.77□□□□□ -0.37
CACNA1A-228ENST00000636610 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 LGALS8O00214 317 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 FOXS1O43638 330 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 OR7A10O76100 309 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 AK1P00568 194 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 RNH1P13489 461 aaKnown RBP12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 CXCL2P19875 107 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 GPR143P51810 404 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 GFERP55789 205 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 RAB14P61106 215 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 OVCH1Q7RTY7 1134 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 SYS1Q8N2H4 156 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 UBQLN2Q9UHD9 624 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 SCP2D1Q9UJQ7 156 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 SCML1Q9UN30 329 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 PCDH15Q96QU1 1955 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 KIF26BQ2KJY2 2108 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 TRAV18A0A075B6X5 111 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 C17orf105B2RV13 164 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 TSPAN4O14817 238 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 TNFP01375 233 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 AKT2P31751 481 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 ART1P52961 327 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 TAS2R20P59543 309 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 RPL18Q07020 188 aaKnown RBP12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 SHHQ15465 462 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 ZNF782Q6ZMW2 699 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 LSMEM1Q8N8F7 131 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 NKD1Q969G9 470 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 TGM7Q96PF1 710 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 NXF5Q9H1B4 397 aaKnown RBP12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 OBP2AQ9NY56 170 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 PCOLCE2Q9UKZ9 415 aa12.76□□□□□ -0.37
CACNA1A-228ENST00000636610 OR5K3A6NET4 321 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 HCRTR2O43614 444 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 CTNSO60931 367 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 SDC3O75056 442 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 ITGA10O75578 1167 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 GLCEO94923 617 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 THEGLP0DJG4 465 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 DMDP11532 3685 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 B3GNTL1Q67FW5 361 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 Q6ZS52 159 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 NDUFAF7Q7L592 441 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 FGD2Q7Z6J4 655 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 PHOSPHO2Q8TCD6 241 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TSLPQ969D9 159 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TPSD1Q9BZJ3 242 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 CHST6Q9GZX3 395 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 DHCR7Q9UBM7 475 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 FREM2Q5SZK8 3169 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 L7N2F9 121 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 SEMA4FO95754 770 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 IFNA7P01567 189 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 CD53P19397 219 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 MST1P26927 711 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TACR3P29371 465 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 EGR4Q05215 589 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 OPCMLQ14982 345 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 EXOSC6Q5RKV6 272 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 ZCCHC12Q6PEW1 402 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TMEM151BQ8IW70 566 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 GABRG3Q99928 467 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 COPZ2Q9P299 210 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 ATXN7L1Q9ULK2 861 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 A0A1W2PPL8 197 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 GABARAPH6UMI1 98 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TNFRSF4P43489 277 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 DMRTC1Q5HYR2 192 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 GPR139Q6DWJ6 353 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TMEM205Q6UW68 189 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 LINC00114Q6XXX2 140 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TMED4Q7Z7H5 227 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 C19orf47Q8N9M1 422 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 TEX19Q8NA77 164 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 PMEPA1Q969W9 287 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 CXorf58Q96LI9 332 aa12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 MS4A7Q9GZW8 240 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-228ENST00000636610 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 RPS10-NUDT3A0A1W2PQS6 291 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 CLDN4O14493 209 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 RBM34P42696 430 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 Q499Y3 187 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 MESTQ5EB52 335 aa12.74□□□□□ -0.37
CACNA1A-228ENST00000636610 C16orf47Q6ZP98 133 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms