RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 HMGA2P52926 109 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 FOXG1P55316 489 aaPredicted RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 PRPS1P60891 318 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 ROR2Q01974 943 aaKnown RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 CAMK2DQ13557 499 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 MELKQ14680 651 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 DAZAP2Q15038 168 aaPredicted RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 STK11Q15831 433 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 ZBED5Q49AG3 693 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 HMBOX1Q6NT76 420 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 LINC00471Q8N535 108 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 C1orf162Q8NEQ5 155 aaPredicted RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 OR6N1Q8NGY5 312 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 OR6X1Q8NH79 312 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 HSD17B8Q92506 261 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 SLC25A44Q96H78 314 aaPredicted RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 TNFRSF13CQ96RJ3 184 aa13.63□□□□□ -0.23
CLN6-211ENST00000635754 STX18Q9P2W9 335 aaKnown RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
CLN6-211ENST00000635754 NPIPB13A6NJU9 1138 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 NPIPB4C9JG80 1138 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 M0R3G1 203 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 FKBP6O75344 327 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 THBDP07204 575 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 PRF1P14222 555 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 CDH2P19022 906 aaPredicted RBP13.62□□□□□ -0.23
CLN6-211ENST00000635754 CRYGSP22914 178 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 HOXC12P31275 282 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 CSNK1A1P48729 337 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 SH3BGRP55822 239 aaPredicted RBP13.62□□□□□ -0.23
CLN6-211ENST00000635754 FHL1Q13642 323 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 GK3PQ14409 553 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 ACKR1Q16570 336 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 TIMM23BQ5SRD1 257 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 FBXW10Q5XX13 1052 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 C22orf34Q6ZV56 151 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 SSX8Q7RTT4 187 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 P2RY8Q86VZ1 359 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 C20orf196Q8IYI0 205 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 ZNF566Q969W8 418 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 CRLF2Q9HC73 371 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 GPR35Q9HC97 309 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 CCM2LQ9NUG4 571 aaPredicted RBP13.62□□□□□ -0.23
CLN6-211ENST00000635754 U3KQV3 271 aa13.62□□□□□ -0.23
CLN6-211ENST00000635754 UNC119BA6NIH7 251 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 GNGT2O14610 69 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 CCNB2O95067 398 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 NDUFB2O95178 105 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 IGHG1P01857 330 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 FPR3P25089 353 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 RPL4P36578 427 aaKnown RBP13.61□□□□□ -0.23
CLN6-211ENST00000635754 CTXN1P60606 82 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
CLN6-211ENST00000635754 TAB1Q15750 504 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 GABRA6Q16445 453 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 WFDC8Q8IUA0 241 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 C17orf78Q8N4C9 275 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 OR4C15Q8NGM1 316 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 ASB10Q8WXI3 467 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 MUCL1Q96DR8 90 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 POLDIP3Q9BY77 421 aaKnown RBP13.61□□□□□ -0.23
CLN6-211ENST00000635754 ULBP2Q9BZM5 246 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 TXNIPQ9H3M7 391 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 NGBQ9NPG2 151 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 SIGLEC7Q9Y286 467 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 ABCA12Q86UK0 2595 aa13.61□□□□□ -0.23
CLN6-211ENST00000635754 KLF4O43474 513 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 IGHMP01871 453 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 PGA4P0DJD7 388 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 PGA3P0DJD8 388 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 CLRN1P58418 232 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 RPL27P61353 136 aaKnown RBP13.6□□□□□ -0.23
CLN6-211ENST00000635754 PPP1R8Q12972 351 aaKnown RBP13.6□□□□□ -0.23
CLN6-211ENST00000635754 PPA1Q15181 289 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 CEACAM16Q2WEN9 425 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 PHYHD1Q5SRE7 291 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 FAM205BPQ63HN1 556 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 ALKBH2Q6NS38 261 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 C1orf94Q6P1W5 598 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 PGBD2Q6P3X8 592 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 KLHL24Q6TFL4 600 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 IGFN1Q86VF2 1251 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 WDFY1Q8IWB7 410 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 PAPD5Q8NDF8 572 aaKnown RBP13.6□□□□□ -0.23
CLN6-211ENST00000635754 FANK1Q8TC84 345 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 GNPDA2Q8TDQ7 276 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 UTP4Q969X6 686 aaKnown RBP13.6□□□□□ -0.23
CLN6-211ENST00000635754 MUS81Q96NY9 551 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 KATNB1Q9BVA0 655 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 VNN3Q9NY84 501 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 ALPK2Q86TB3 2170 aa13.6□□□□□ -0.23
CLN6-211ENST00000635754 CENPBD1B2RD01 187 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 PTP4A3O75365 173 aa13.59□□□□□ -0.23
CLN6-211ENST00000635754 CTAG2O75638 210 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms