RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 ZNF136P52737 540 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 IST1P53990 364 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RGS8P57771 180 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RPS18P62269 152 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 SPIBQ01892 262 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 CRYZQ08257 329 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 PLCXD2Q0VAA5 305 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 Q0VFX4 171 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ST3GAL3Q11203 375 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 DGCR6Q14129 220 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 FGFBP1Q14512 234 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 MICAQ29983 383 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 MRPL2Q5T653 305 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 H3F3CQ6NXT2 135 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 TBPL2Q6SJ96 375 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 IL20RBQ6UXL0 311 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 IZUMO2Q6UXV1 221 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ZNF836Q6ZNA1 936 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ZNF550Q7Z398 422 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 NUP54Q7Z3B4 507 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 TMEM179BQ7Z7N9 219 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 HMGN2P46Q86SG4 172 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 COMTD1Q86VU5 262 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RANBP3LQ86VV4 465 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 MARCH9Q86YJ5 346 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RAB43Q86YS6 212 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RBM45Q8IUH3 476 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 EPHX4Q8IUS5 362 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 LACC1Q8IV20 430 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ZNF440Q8IYI8 595 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 LINC00471Q8N535 108 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 VANGL1Q8TAA9 524 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 SLC22A8Q8TCC7 542 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 PHF10Q8WUB8 498 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 DNAJC9Q8WXX5 260 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 CNOT9Q92600 299 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 KIAA1143Q96AT1 154 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 TMEM18Q96B42 140 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 TMCO6Q96DC7 493 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 OMA1Q96E52 524 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ZNF597Q96LX8 424 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 PRRC1Q96M27 445 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RDH12Q96NR8 316 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 MCHR1Q99705 422 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RBM4BQ9BQ04 359 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 WFDC6Q9BQY6 131 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 FNDC11Q9BVV2 318 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 RBM4Q9BWF3 364 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ANKRD19PQ9H560 264 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 LIN28AQ9H9Z2 209 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ZBTB20Q9HC78 741 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 ACER3Q9NUN7 267 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 P4HTMQ9NXG6 502 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 USE1Q9NZ43 259 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 TMCC3Q9ULS5 477 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 A4GNTQ9UNA3 340 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 YARS2Q9Y2Z4 477 aaKnown RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 LYVE1Q9Y5Y7 322 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 U3KQV3 271 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 SCN2AQ99250 2005 aa5.05□□□□□ -1.6
LINC00254-202ENST00000633813 EP300Q09472 2414 aaPredicted RBP5.05□□□□□ -1.6
LINC00254-202ENST00000633813 FER1L5A0AVI2 2057 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 ARRDC5A6NEK1 342 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 SH2D7A6NKC9 451 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 GTPBP1O00178 669 aaKnown RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 DLGAP1O14490 977 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 EI24O14681 340 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 FADS1O60427 444 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 EIF4E2O60573 245 aaKnown RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 ICOSLGO75144 302 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 UGT2B11O75310 529 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 OR2J2O76002 312 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 OR5F1O95221 314 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 NADKO95544 446 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 HPRP00739 348 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 SERPINA7P05543 415 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 H1F0P07305 194 aaKnown RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 PRSS2P07478 247 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 GKN3PP0CG01 181 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 ANXA8P13928 327 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 ACADSP16219 412 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 PRKACGP22612 351 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 ACAA2P42765 397 aaKnown RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 NUDT6P53370 316 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 RAD23AP54725 363 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 AQP4P55087 323 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 TAS2R41P59536 307 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 PPP2R2BQ00005 443 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 LTBQ06643 244 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 EPS8Q12929 822 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 PPP1R8Q12972 351 aaKnown RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 CHAF1BQ13112 559 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 GANABQ14697 944 aaKnown RBP5.04□□□□□ -1.6
LINC00254-202ENST00000633813 TRAM2Q15035 370 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 NPTX1Q15818 432 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 NTRK2Q16620 822 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 RFX4Q33E94 735 aa5.04□□□□□ -1.6
LINC00254-202ENST00000633813 TMEM95Q3KNT9 176 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms