RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 BATF2Q8N1L9 274 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 LIPHQ8WWY8 451 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 FGGYQ96C11 551 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ATOH8Q96SQ7 321 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 H0Y8G0 127 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SNRNP70P08621 437 aaKnown RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 FURINP09958 794 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF750Q32MQ0 723 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 HSF5Q4G112 596 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 PGAP1Q75T13 922 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 PDLIM5Q96HC4 596 aaKnown RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SHARPINQ9H0F6 387 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ZBP1Q9H171 429 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SLAMF8Q9P0V8 285 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SPINT2O43291 252 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ALOX12BO75342 701 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 MGST1P10620 155 aaKnown RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF813Q6ZN06 617 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 GAB3Q8WWW8 586 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 NMNAT3Q96T66 252 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.86□□□□□ -0.671e-6■■■■□ 20
SHPRH-211ENST00000629427 SEMA4GQ9NTN9 838 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 KNL1Q8NG31 2342 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 IGHV3-20A0A0C4DH32 117 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 HTR2CP28335 458 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 HNRNPFP52597 415 aaKnown RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 B3GLCTQ6Y288 498 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 CNTN4Q8IWV2 1026 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ARFGAP1Q8N6T3 406 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 OR13C9Q8NGT0 318 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 TIMD4Q96H15 378 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SLC22A12Q96S37 553 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 RCE1Q9Y256 329 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 LINC01553A4QN01 128 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ARNTLO00327 626 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ALDOCP09972 364 aaKnown RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 GABRA4P48169 554 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 VRK3Q8IV63 474 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 GLIPR2Q9H4G4 154 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 E9PI62 339 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 H0YIV9 168 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 UBCP0CG48 685 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 EMX1Q04741 257 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 MYBPHQ13203 477 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 SELPLGQ14242 412 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 HIST2H3PS2Q5TEC6 136 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 LYPD4Q6UWN0 246 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 OR56B4Q8NH76 319 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 CMTM2Q8TAZ6 248 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 CCDC74AQ96AQ1 378 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 ABHD6Q9BV23 337 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 BARHL1Q9BZE3 327 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TXNL4BQ9NX01 149 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TMEM221A6NGB7 291 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TBPL2Q6SJ96 375 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 IDO2Q6ZQW0 420 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 MMACHCQ9Y4U1 282 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TMEM82A0PJX8 343 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 PHF1O43189 567 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 CD27P26842 260 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 GPR85P60893 370 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF836Q6ZNA1 936 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 NAA40Q86UY6 237 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 WDR5BQ86VZ2 330 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 CPEB3Q8NE35 698 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 CPNE5Q9HCH3 593 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 HS3ST3A1Q9Y663 406 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 AADACP22760 399 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TDHQ8IZJ6 230 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 OR7G1Q8NGA0 311 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 DCLRE1CQ96SD1 692 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 PPA2Q9H2U2 334 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 SLC39A9Q9NUM3 307 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 OBP2AQ9NY56 170 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 LSAMPQ13449 338 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 IL10RAQ13651 578 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 HACD4Q5VWC8 232 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 LPCAT3Q6P1A2 487 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 NANPQ8TBE9 248 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 SLC37A2Q8TED4 501 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TMEM255BQ8WV15 326 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 GGHQ92820 318 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 CPNE4Q96A23 557 aaPredicted RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 ELSPBP1Q96BH3 223 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 P2RY12Q9H244 342 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 NIPAL2Q9H841 368 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TDRD6O60522 2096 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 REEP5Q00765 189 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 SHHQ15465 462 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 COX20Q5RI15 118 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 YRDCQ86U90 279 aaKnown RBP10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TMEM217Q8N7C4 229 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 GJC3Q8NFK1 279 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 ABHD4Q8TB40 342 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 SPPL3Q8TCT6 385 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 APH1AQ96BI3 265 aa10.85□□□□□ -0.67
SHPRH-211ENST00000629427 TM4SF18Q96CE8 201 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms