RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 GEMIN6Q8WXD5 167 aaKnown RBP12.4□□□□□ -0.42
PNKP-223ENST00000629179 SGTBQ96EQ0 304 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 RADILQ96JH8 1075 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 HSH2DQ96JZ2 352 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 LRR1Q96L50 414 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 LRRC37BQ96QE4 947 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 CCT8L2Q96SF2 557 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 SPAG4Q9NPE6 437 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 OBP2BQ9NPH6 170 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 ZNF701Q9NV72 531 aaPredicted RBP12.4□□□□□ -0.42
PNKP-223ENST00000629179 TAGLN3Q9UI15 199 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 POU2F3Q9UKI9 436 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 MED31Q9Y3C7 131 aa12.4□□□□□ -0.42
PNKP-223ENST00000629179 ARPC4-TTLL3A0A0A6YYG9 625 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 ZNF99A8MXY4 864 aaPredicted RBP12.39□□□□□ -0.43
PNKP-223ENST00000629179 OVOL3O00110 214 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 FFAR1O14842 300 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 F13BP05160 661 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 PAX1P15863 534 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 CDKN1AP38936 164 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 ATP5J2P56134 94 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 RPL18Q07020 188 aaKnown RBP12.39□□□□□ -0.43
PNKP-223ENST00000629179 MELKQ14680 651 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 GLYATQ6IB77 296 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 YTHDF3Q7Z739 585 aaKnown RBP12.39□□□□□ -0.43
PNKP-223ENST00000629179 DEPDC4Q8N2C3 294 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 FAM156AQ8NDB6 213 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 FNDC11Q9BVV2 318 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 B3GAT2Q9NPZ5 323 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 DLL4Q9NR61 685 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 MAN2C1Q9NTJ4 1040 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 MOKQ9UQ07 419 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 ATP23Q9Y6H3 246 aa12.39□□□□□ -0.43
PNKP-223ENST00000629179 ZNF469Q96JG9 3925 aaPredicted RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 IGHV1-18A0A0C4DH31 117 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 ZNF503-AS2A6NEH8 195 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 ATP6V1G2-DDX39BF2Z307 99 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 TMCC2O75069 709 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 DCTN3O75935 186 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 BCL10O95999 233 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 IGF2P01344 180 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 IFI30P13284 250 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 HOXB1P14653 301 aaPredicted RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 TCN1P20061 433 aaPredicted RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 IFNA8P32881 189 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 AQP2P41181 271 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 CSNK1A1P48729 337 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 PRSS57Q6UWY2 283 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 TSEN54Q7Z6J9 526 aaKnown RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 MEX3DQ86XN8 651 aaKnown RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 OFCC1Q8IZS5 231 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 MOSPD2Q8NHP6 518 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 TMEM54Q969K7 222 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 GTPBP3Q969Y2 492 aaKnown RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 ADAD1Q96M93 576 aaKnown RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 Q96MF0 132 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 SLC38A2Q96QD8 506 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 DHRS9Q9BPW9 319 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 TRAF4Q9BUZ4 470 aaPredicted RBP12.38□□□□□ -0.43
PNKP-223ENST00000629179 ULBP2Q9BZM5 246 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 SEC61A2Q9H9S3 476 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 POFUT2Q9Y2G5 429 aa12.38□□□□□ -0.43
PNKP-223ENST00000629179 CHD3Q12873 2000 aaKnown RBP12.37□□□□□ -0.43
PNKP-223ENST00000629179 PRSS23O95084 383 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 CELA3BP08861 270 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 MAKP20794 623 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 TTKP33981 857 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 MSX2P35548 267 aaPredicted RBP12.37□□□□□ -0.43
PNKP-223ENST00000629179 CAPZA2P47755 286 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 FABP6P51161 128 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 TRAM2Q15035 370 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 LRFN4Q6PJG9 635 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 TBPL2Q6SJ96 375 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 DTX2Q86UW9 622 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 MYPOPQ86VE0 399 aaPredicted RBP12.37□□□□□ -0.43
PNKP-223ENST00000629179 NRMQ8IXM6 262 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 PGAM4Q8N0Y7 254 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 ANKS4BQ8N8V4 417 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 LIPHQ8WWY8 451 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 BPIFA2Q96DR5 249 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 SLC25A44Q96H78 314 aaPredicted RBP12.37□□□□□ -0.43
PNKP-223ENST00000629179 CDRT15Q96T59 188 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 INIPQ9NRY2 104 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 DCAF13Q9NV06 445 aaKnown RBP12.37□□□□□ -0.43
PNKP-223ENST00000629179 FAIMQ9NVQ4 179 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 GLTPQ9NZD2 209 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 CRNNQ9UBG3 495 aaPredicted RBP12.37□□□□□ -0.43
PNKP-223ENST00000629179 RPS6KA6Q9UK32 745 aa12.37□□□□□ -0.43
PNKP-223ENST00000629179 A0A1W2PRG6 482 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 NDUFS7O75251 213 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 GMNNO75496 209 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 IGLV1-44P01699 117 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 HLA-HP01893 362 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 TSPAN19P0C672 248 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 CECR9P0C854 216 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 HSD17B1P14061 328 aa12.36□□□□□ -0.43
PNKP-223ENST00000629179 B4GALT1P15291 398 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms