RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ADAP00813 363 aa13□□□□□ -0.33
PNKP-221ENST00000627317 GASTP01350 101 aa13□□□□□ -0.33
PNKP-221ENST00000627317 IGHV3-9P01782 118 aa13□□□□□ -0.33
PNKP-221ENST00000627317 POU2F1P14859 743 aa13□□□□□ -0.33
PNKP-221ENST00000627317 ZNF23P17027 643 aa13□□□□□ -0.33
PNKP-221ENST00000627317 GSTM3P21266 225 aa13□□□□□ -0.33
PNKP-221ENST00000627317 EDNRAP25101 427 aa13□□□□□ -0.33
PNKP-221ENST00000627317 NTF4P34130 210 aa13□□□□□ -0.33
PNKP-221ENST00000627317 SELENOPP49908 381 aa13□□□□□ -0.33
PNKP-221ENST00000627317 BIDP55957 195 aa13□□□□□ -0.33
PNKP-221ENST00000627317 CTXN1P60606 82 aa13□□□□□ -0.33
PNKP-221ENST00000627317 MELKQ14680 651 aa13□□□□□ -0.33
PNKP-221ENST00000627317 ZNF474Q6S9Z5 364 aaPredicted RBP13□□□□□ -0.33
PNKP-221ENST00000627317 SMARCD3Q6STE5 483 aa13□□□□□ -0.33
PNKP-221ENST00000627317 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
PNKP-221ENST00000627317 BEND4Q6ZU67 534 aa13□□□□□ -0.33
PNKP-221ENST00000627317 IGFN1Q86VF2 1251 aa13□□□□□ -0.33
PNKP-221ENST00000627317 HIPK1Q86Z02 1210 aa13□□□□□ -0.33
PNKP-221ENST00000627317 HS3ST5Q8IZT8 346 aa13□□□□□ -0.33
PNKP-221ENST00000627317 ATG16L2Q8NAA4 619 aa13□□□□□ -0.33
PNKP-221ENST00000627317 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
PNKP-221ENST00000627317 CENPNQ96H22 339 aaPredicted RBP13□□□□□ -0.33
PNKP-221ENST00000627317 TXNDC15Q96J42 360 aa13□□□□□ -0.33
PNKP-221ENST00000627317 ADAD1Q96M93 576 aaKnown RBP13□□□□□ -0.33
PNKP-221ENST00000627317 OR2M2Q96R28 347 aa13□□□□□ -0.33
PNKP-221ENST00000627317 FEVQ99581 238 aa13□□□□□ -0.33
PNKP-221ENST00000627317 PKP2Q99959 881 aa13□□□□□ -0.33
PNKP-221ENST00000627317 EMC6Q9BV81 110 aa13□□□□□ -0.33
PNKP-221ENST00000627317 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
PNKP-221ENST00000627317 POLDIP3Q9BY77 421 aaKnown RBP13□□□□□ -0.33
PNKP-221ENST00000627317 SEMA6AQ9H2E6 1030 aa13□□□□□ -0.33
PNKP-221ENST00000627317 ZNF556Q9HAH1 456 aa13□□□□□ -0.33
PNKP-221ENST00000627317 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
PNKP-221ENST00000627317 GALNT8Q9NY28 637 aa13□□□□□ -0.33
PNKP-221ENST00000627317 UPB1Q9UBR1 384 aa13□□□□□ -0.33
PNKP-221ENST00000627317 PRSS50Q9UI38 385 aa13□□□□□ -0.33
PNKP-221ENST00000627317 FOXD3Q9UJU5 478 aaPredicted RBP13□□□□□ -0.33
PNKP-221ENST00000627317 ANKRD17O75179 2603 aaKnown RBP12.99□□□□□ -0.33
PNKP-221ENST00000627317 FREM1Q5H8C1 2179 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 FAM221AA4D161 298 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SLC35F4A4IF30 521 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 NPIPB13A6NJU9 1138 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 NPIPB4C9JG80 1138 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 CNOT4O95628 575 aaKnown RBP12.99□□□□□ -0.33
PNKP-221ENST00000627317 ANXA8P13928 327 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SLC6A6P31641 620 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SORDQ00796 357 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 CAMK2DQ13557 499 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 FHL1Q13642 323 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SNTB1Q13884 538 aaKnown RBP12.99□□□□□ -0.33
PNKP-221ENST00000627317 ACKR1Q16570 336 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 TSPO2Q5TGU0 170 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 CARD17Q5XLA6 110 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 FBXW9Q5XUX1 488 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 HMBOX1Q6NT76 420 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 RPL13AP3Q6NVV1 102 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 Q6ZT83 130 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 ZDHHC13Q8IUH4 622 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 TMEM123Q8N131 208 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 GPR137CQ8N3F9 429 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SVOPLQ8N434 492 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 ICA1LQ8NDH6 482 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 OR52L1Q8NGH7 329 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 KATNB1Q9BVA0 655 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 OR52D1Q9H346 318 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 TXNIPQ9H3M7 391 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SLC7A10Q9NS82 523 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 CRIM1Q9NZV1 1036 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 STX18Q9P2W9 335 aaKnown RBP12.99□□□□□ -0.33
PNKP-221ENST00000627317 IL20RAQ9UHF4 553 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 CDH10Q9Y6N8 788 aa12.99□□□□□ -0.33
PNKP-221ENST00000627317 SAC3D1A6NKF1 404 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ZNF587BE7ETH6 402 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 G3V2T6 193 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 PTP4A3O75365 173 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ZNF432O94892 652 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 IGHG1P01857 330 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 IGHMP01871 453 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 CD14P08571 375 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ZNF26P17031 533 aaPredicted RBP12.98□□□□□ -0.33
PNKP-221ENST00000627317 PRKACGP22612 351 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 CD79BP40259 229 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 PEX19P40855 299 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 CSNK1A1P48729 337 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 RPL27P61353 136 aaKnown RBP12.98□□□□□ -0.33
PNKP-221ENST00000627317 ERVK-25P63136 954 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 FAPQ12884 760 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 FAM205BPQ63HN1 556 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 NHLRC1Q6VVB1 395 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 RASSF6Q6ZTQ3 369 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ABHD12BQ7Z5M8 362 aaPredicted RBP12.98□□□□□ -0.33
PNKP-221ENST00000627317 KIF18BQ86Y91 864 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 PQLC1Q8N2U9 271 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 LRRC75AQ8NAA5 344 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 OR6N1Q8NGY5 312 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 OR6X1Q8NH79 312 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ASB10Q8WXI3 467 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 ZNF566Q969W8 418 aa12.98□□□□□ -0.33
PNKP-221ENST00000627317 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms