RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TPD52L3Q96J77 140 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 MPP4Q96JB8 637 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 ZNF583Q96ND8 569 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 KCNS3Q9BQ31 491 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 ELAC2Q9BQ52 826 aaKnown RBP5.61□□□□□ -1.51
TCF4-249ENST00000625716 TMEM204Q9BSN7 226 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 TMEM43Q9BTV4 400 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 PTDSS2Q9BVG9 487 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 C1QTNF6Q9BXI9 259 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 FAM107BQ9H098 131 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 FKRPQ9H9S5 495 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 SLC17A5Q9NRA2 495 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 CISD1Q9NZ45 108 aaKnown RBP5.61□□□□□ -1.51
TCF4-249ENST00000625716 ARMCX1Q9P291 453 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 SLC7A7Q9UM01 511 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 RCE1Q9Y256 329 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 SH3GLB1Q9Y371 365 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 NOX1Q9Y5S8 564 aa5.61□□□□□ -1.51
TCF4-249ENST00000625716 ANKHD1Q8IWZ3 2542 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 HEATR5AQ86XA9 2040 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 FBN2P35556 2912 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ELOVL7A1L3X0 281 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 FAM220BPB1ANY3 271 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 PDLIM1O00151 329 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 NDUFAB1O14561 156 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 TPST2O60704 377 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 GMNNO75496 209 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 UPK3AO75631 287 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 SERPINI2O75830 405 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 CH25HO95992 272 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 BGLAPP02818 100 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ADORA3P0DMS8 318 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 UMPSP11172 480 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 PTNP21246 168 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 CD40P25942 277 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 CAPZA2P47755 286 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 PTH2RP49190 550 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 GZMMP51124 257 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 P2RY4P51582 365 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 FOXG1P55316 489 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 SH3BGRP55822 239 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 ATP5J2P56134 94 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 TAS2R41P59536 307 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ROR2Q01974 943 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 POU3F1Q03052 451 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 PUDPQ08623 228 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 FOXD4Q12950 439 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 NPTX1Q15818 432 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 LRRC23Q53EV4 343 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 AGAP6Q5VW22 663 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 CARD17Q5XLA6 110 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ANKRD16Q6P6B7 361 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 PRSS57Q6UWY2 283 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 DEF8Q6ZN54 512 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 YTHDF3Q7Z739 585 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 LSRQ86X29 649 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 CARM1Q86X55 608 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 CALHM3Q86XJ0 350 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 RBM45Q8IUH3 476 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 MICU2Q8IYU8 434 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 FBXL14Q8N1E6 418 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ADPRHL1Q8NDY3 354 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 WFDC11Q8NEX6 87 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 KBTBD8Q8NFY9 601 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 GPR32P1Q8NGA4 272 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 OR5J2Q8NH18 312 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ADAMTS16Q8TE57 1224 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 CMTM5Q96DZ9 223 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 SLC41A3Q96GZ6 507 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ZNF317Q96PQ6 595 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 HOPXQ9BPY8 73 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 WFDC6Q9BQY6 131 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 RSPO3Q9BXY4 272 aaPredicted RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 LINC00470Q9BZP3 86 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 POLR2J2Q9GZM3 115 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 POLR2J3Q9H1A7 115 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 CNTD2Q9H8S5 307 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 MOV10Q9HCE1 1003 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 OBP2BQ9NPH6 170 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 NANSQ9NR45 359 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 MRPL39Q9NYK5 338 aaKnown RBP5.6□□□□□ -1.51
TCF4-249ENST00000625716 SEC14L4Q9UDX3 406 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 SLC25A15Q9Y619 301 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 ATP23Q9Y6H3 246 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 PDZD2O15018 2839 aa5.6□□□□□ -1.51
TCF4-249ENST00000625716 IGKV1D-42A0A075B6H8 117 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 LOC102725191A0A1B0GVB3 256 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 GMNCA6NCL1 334 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 FAM171A2A8MVW0 826 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 C11orf98E9PRG8 122 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 MS4A18H0YCH9 400 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 M0R3G1 203 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 FXYD1O00168 92 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 KPNA4O00629 521 aaPredicted RBP5.59□□□□□ -1.51
TCF4-249ENST00000625716 PLPP3O14495 311 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 DYNC1I1O14576 645 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 RNF13O43567 381 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 ZNF682O95780 498 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms