RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SKA3Q8IX90 412 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 CCDC36Q8IYA8 594 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 GLB1L3Q8NCI6 653 aaPredicted RBP9.45□□□□□ -0.9
DDX41-218ENST00000625286 FAHD2AQ96GK7 314 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 LRR1Q96L50 414 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 OR52B2Q96RD2 323 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 MS4A5Q9H3V2 200 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 C12orf10Q9HB07 376 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 A4GALTQ9NPC4 353 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 ESM1Q9NQ30 184 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 SDR39U1Q9NRG7 319 aaPredicted RBP9.45□□□□□ -0.9
DDX41-218ENST00000625286 SLC25A37Q9NYZ2 338 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 SLAMF8Q9P0V8 285 aa9.45□□□□□ -0.9
DDX41-218ENST00000625286 PLPP3O14495 311 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 HDAC3O15379 428 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 RGS16O15492 202 aaPredicted RBP9.44□□□□□ -0.9
DDX41-218ENST00000625286 DEAF1O75398 565 aaPredicted RBP9.44□□□□□ -0.9
DDX41-218ENST00000625286 PTDSS1P48651 473 aaKnown RBP9.44□□□□□ -0.9
DDX41-218ENST00000625286 ARFIP2P53365 341 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 TMEM33P57088 247 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 HILS1P60008 231 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 ERVS71-1P61550 626 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 HNRNPA0Q13151 305 aaKnown RBP9.44□□□□□ -0.9
DDX41-218ENST00000625286 LRFN4Q6PJG9 635 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 UGT2A3Q6UWM9 527 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 NET1Q7Z628 596 aaPredicted RBP9.44□□□□□ -0.9
DDX41-218ENST00000625286 UEVLDQ8IX04 471 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 MREGQ8N565 214 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 ADPRHL1Q8NDY3 354 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 FAM216AQ8WUB2 273 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 GTF3AQ92664 365 aaKnown RBP9.44□□□□□ -0.9
DDX41-218ENST00000625286 SLC38A4Q969I6 547 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 SLC35B4Q969S0 331 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 ZBTB18Q99592 522 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 TMPRSS13Q9BYE2 586 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 KCNK9Q9NPC2 374 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 SLC52A3Q9NQ40 469 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 DUSP13Q9UII6 198 aa9.44□□□□□ -0.9
DDX41-218ENST00000625286 CLIC1O00299 241 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 PPIHO43447 177 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 PLPP2O43688 288 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 CDC14BO60729 498 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 ANP32DO95626 131 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 CCL2P13500 99 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 IDO1P14902 403 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 GTF2E2P29084 291 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 PRKAR1BP31321 381 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 RBMXP38159 391 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 POLR2JP52435 117 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 MRPS11P82912 194 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 TRMT5Q32P41 509 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 TMEM255AQ5JRV8 349 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 AVPI1Q5T686 147 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 NFKBIDQ8NI38 313 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 BBS10Q8TAM1 723 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 TMEM54Q969K7 222 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 ITCHQ96J02 903 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 FOXB1Q99853 325 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 PAIP2Q9BPZ3 127 aaKnown RBP9.43□□□□□ -0.9
DDX41-218ENST00000625286 IKZF5Q9H5V7 419 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 ZIM2Q9NZV7 527 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 PCDHB10Q9UN67 800 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 POFUT2Q9Y2G5 429 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 CACNG2Q9Y698 323 aa9.43□□□□□ -0.9
DDX41-218ENST00000625286 A0A0B4J2E0 115 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 A0A1B0GX12 115 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 LYPD3O95274 346 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 TFP02787 698 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 THY1P04216 161 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 SERPINA5P05154 406 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 FAM157BP0CG42 384 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 ETS2P15036 469 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 ADRA2CP18825 462 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 EPHA1P21709 976 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 PCMT1P22061 227 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 CDH12P55289 794 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 CCL8P80075 99 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 MVKQ03426 396 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 PMS2P3Q13401 168 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 OR1Q1Q15612 314 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 C6orf10Q5SRN2 563 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 GKAP1Q5VSY0 366 aaPredicted RBP9.42□□□□□ -0.9
DDX41-218ENST00000625286 NXNQ6DKJ4 435 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 WDR93Q6P2C0 686 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 ULK3Q6PHR2 472 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 DHRS4L2Q6PKH6 230 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 LINC00114Q6XXX2 140 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 MSANTD1Q6ZTZ1 278 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 USP43Q70EL4 1123 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 TSPYL5Q86VY4 417 aaPredicted RBP9.42□□□□□ -0.9
DDX41-218ENST00000625286 FUNDC1Q8IVP5 155 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 ZDHHC22Q8N966 263 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 ANKRD42Q8N9B4 389 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 OR6S1Q8NH40 331 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 OR51F2Q8NH61 342 aa9.42□□□□□ -0.9
DDX41-218ENST00000625286 DNAJA4Q8WW22 397 aaPredicted RBP9.42□□□□□ -0.9
DDX41-218ENST00000625286 GCDHQ92947 438 aaPredicted RBP9.42□□□□□ -0.9
DDX41-218ENST00000625286 SH3GL3Q99963 347 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms