RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PSMB1P20618 241 aaKnown RBP11.21□□□□□ -0.61
PNKP-217ENST00000625216 ENPP1P22413 925 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 CCKARP32238 428 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 HTR3AP46098 478 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 POLR2HP52434 150 aaKnown RBP11.21□□□□□ -0.61
PNKP-217ENST00000625216 CRISP1P54107 249 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 CSNK2A1P68400 391 aaPredicted RBP11.21□□□□□ -0.61
PNKP-217ENST00000625216 EGR4Q05215 589 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 MED21Q13503 144 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 POU4F3Q15319 338 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 DEFB113Q30KQ7 82 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 ZNF691Q5VV52 312 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 TTC23Q5W5X9 447 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 ZNF620Q6ZNG0 422 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 TMPPEQ6ZT21 453 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 RASSF6Q6ZTQ3 369 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 SLC46A3Q7Z3Q1 461 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 TUSC5Q8IXB3 177 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 OR13C2Q8NGS9 318 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 ABHD3Q8WU67 409 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 BPIFA2Q96DR5 249 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 OR5B2Q96R09 309 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 PLA2G12AQ9BZM1 189 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 EGLN3Q9H6Z9 239 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 BCO1Q9HAY6 547 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 KRCC1Q9NPI7 259 aaPredicted RBP11.21□□□□□ -0.61
PNKP-217ENST00000625216 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.61
PNKP-217ENST00000625216 TMEM5Q9Y2B1 443 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 TMED7Q9Y3B3 224 aa11.21□□□□□ -0.61
PNKP-217ENST00000625216 ZC3H12DA2A288 527 aaKnown RBP11.2□□□□□ -0.62
PNKP-217ENST00000625216 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 DNPH1O43598 174 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 CYTIPO60759 359 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 OR7A10O76100 309 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 GSTM3P21266 225 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 GGT2P36268 569 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 MAP2K6P52564 334 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 FXYD6P3P58550 94 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 ESRRGP62508 458 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 COX10Q12887 443 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 PDK3Q15120 406 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 SYT14P1Q58G82 188 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 BEX5Q5H9J7 111 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 TMEM236Q5W0B7 351 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 TMPRSS11FQ6ZWK6 438 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 ADGRG3Q86Y34 549 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 STEAP2Q8NFT2 490 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 SGTBQ96EQ0 304 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 PIK3IP1Q96FE7 263 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 HRASLS5Q96KN8 279 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 MUS81Q96NY9 551 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 PTDSS2Q9BVG9 487 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 SLC19A3Q9BZV2 496 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 C12orf49Q9H741 205 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 BEX4Q9NWD9 120 aaPredicted RBP11.2□□□□□ -0.62
PNKP-217ENST00000625216 CHRNA9Q9UGM1 479 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 HDGFL3Q9Y3E1 203 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 GMPPBQ9Y5P6 360 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 CDH10Q9Y6N8 788 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 ITPR3Q14573 2671 aa11.2□□□□□ -0.62
PNKP-217ENST00000625216 A0A1W2PNR3 127 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 A0A1W2PPR1 153 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 ZNF724A8MTY0 619 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 EFCAB9A8MZ26 197 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 M0R129 80 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 SULT2B1O00204 365 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 SIAH2O43255 324 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 NPIPB7O75200 414 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 IGF2P01344 180 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 CD99P14209 185 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 CD53P19397 219 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 CXCR1P25024 350 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 POU1F1P28069 291 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 DIO1P49895 249 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 NR1H2P55055 460 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 LTBQ06643 244 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 RASGEF1BQ0VAM2 473 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 FHL1Q13642 323 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 P2RY6Q15077 328 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 PTGES3Q15185 160 aaKnown RBP11.19□□□□□ -0.62
PNKP-217ENST00000625216 ZNF74Q16587 644 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 SLX4IPQ5VYV7 408 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 C12orf73Q69YU5 71 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 UGT2A3Q6UWM9 527 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 NUFIP2Q7Z417 695 aaKnown RBP11.19□□□□□ -0.62
PNKP-217ENST00000625216 C8orf59Q8N0T1 100 aaPredicted RBP11.19□□□□□ -0.62
PNKP-217ENST00000625216 GABRG1Q8N1C3 465 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 IQCF1Q8N6M8 205 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 CLDN22Q8N7P3 220 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 FANK1Q8TC84 345 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 PIGTQ969N2 578 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 ZHX1-C8orf76Q96EF9 292 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 KTI12Q96EK9 354 aaPredicted RBP11.19□□□□□ -0.62
PNKP-217ENST00000625216 ZC3HAV1LQ96H79 300 aaKnown RBP11.19□□□□□ -0.62
PNKP-217ENST00000625216 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 OR11A1Q9GZK7 315 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 ACTR6Q9GZN1 396 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms