RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 KBTBD8Q8NFY9 601 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 OR6X1Q8NH79 312 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 PIGTQ969N2 578 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 FBXW5Q969U6 566 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZNF566Q969W8 418 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 LRR1Q96L50 414 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 TMEM204Q9BSN7 226 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 ANKRD19PQ9H560 264 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 OBP2BQ9NPH6 170 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 INIPQ9NRY2 104 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 NDUFAF4Q9P032 175 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 POFUT2Q9Y2G5 429 aa12.24□□□□□ -0.45
PCDHGC3-208ENST00000622836 ALPK2Q86TB3 2170 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 A0A087WUU8 490 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZNF99A8MXY4 864 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 EFCAB9A8MZ26 197 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 SMPD2O60906 423 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 SEC14L2O76054 403 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 DIRAS1O95057 198 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 STAMBPO95630 424 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 IGHG1P01857 330 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 FABP3P05413 133 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 MAKP20794 623 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 FUT4P22083 530 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 CD40P25942 277 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 DAP3P51398 398 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 CDH11P55287 796 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 CLRN1P58418 232 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 TUBA1BP68363 451 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 TUBA4AP68366 448 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 LSM11P83369 360 aaKnown RBP eCLIP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 VLDLRP98155 873 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 PRKCDQ05655 676 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 ALG10Q5BKT4 473 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 PHYHD1Q5SRE7 291 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 C1QTNF12Q5T7M4 302 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 TBPL2Q6SJ96 375 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 CYP2R1Q6VVX0 501 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 MBOAT2Q6ZWT7 520 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 OAFQ86UD1 273 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 MEX3DQ86XN8 651 aaKnown RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 OR52J3Q8NH60 311 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 OR51A7Q8NH64 312 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 MOSPD2Q8NHP6 518 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 LIPHQ8WWY8 451 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 BCL2L2Q92843 193 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 NEUROG1Q92886 237 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 MBD6Q96DN6 1003 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 SLC25A44Q96H78 314 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 RADILQ96JH8 1075 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 ALPK1Q96QP1 1244 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 PIP5K1AQ99755 562 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 FOXC2Q99958 501 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 KCNS3Q9BQ31 491 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 KRCC1Q9NPI7 259 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 MGAT4BQ9UQ53 548 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 CADP27708 2225 aa12.23□□□□□ -0.45
PCDHGC3-208ENST00000622836 A0A1W2PRQ8 180 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 PDE5AO76074 875 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 PRSS23O95084 383 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 T-ENOLP0DO92 83 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 PAX7P23759 505 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 GPR4P46093 362 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 SMIM11AP58511 58 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 SPIBQ01892 262 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 TOP3AQ13472 1001 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 DGCR6Q14129 220 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 LAPTM4AQ15012 233 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZNF672Q499Z4 452 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 PODNL1Q6PEZ8 512 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 NHLRC1Q6VVB1 395 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZNF813Q6ZN06 617 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 DHFR2Q86XF0 187 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 WDFY1Q8IWB7 410 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 MAGEE2Q8TD90 523 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 TMEM171Q8WVE6 324 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 ZNF837Q96EG3 531 aaPredicted RBP12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 C7orf34Q96L11 122 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 NDEL1Q9GZM8 345 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 GLTPQ9NZD2 209 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 ACTR3BQ9P1U1 418 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 AURKCQ9UQB9 309 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 TMEM5Q9Y2B1 443 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 HIF3AQ9Y2N7 669 aa12.22□□□□□ -0.45
PCDHGC3-208ENST00000622836 TRAV27A0A087WT01 109 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 ARPC4-TTLL3A0A0A6YYG9 625 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 UBOX5O94941 541 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 GADD45GO95257 159 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 B4GALT1P15291 398 aa12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 RPL4P36578 427 aaKnown RBP12.21□□□□□ -0.45
PCDHGC3-208ENST00000622836 SLC9A3P48764 834 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms