RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GJA4P35212 333 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 FLI1Q01543 452 aaPredicted RBP10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 MBOAT2Q6ZWT7 520 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 KLHDC8BQ8IXV7 354 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 NT5DC2Q9H857 520 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 WASH6PQ9NQA3 447 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 C1GALT1Q9NS00 363 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 VAPAQ9P0L0 249 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 TUBGCP6Q96RT7 1819 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 TFAP2CQ92754 450 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 GMLQ99445 158 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SLCO5A1Q9H2Y9 848 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SAGE1Q9NXZ1 904 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 PIGLQ9Y2B2 252 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 GPR45Q9Y5Y3 372 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ACTL7AQ9Y615 435 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ZCWPW2A0A1B0GU75 182 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 MEIS3P2A8K0S8 358 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ADRA1AP35348 466 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 Q6ZTK2 550 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 FCRLAQ7L513 359 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 LRFN5Q96NI6 719 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 H3BMQ9 156 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 OR7A17O14581 309 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 IMPA1P29218 277 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 TSPAN31Q12999 210 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 FXNQ16595 210 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 GGTA1PQ4G0N0 100 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 LDLRAD1Q5T700 205 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF439Q8NDP4 499 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC30A7Q8NEW0 376 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ABHD11Q8NFV4 315 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ZCCHC4Q9H5U6 513 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 TREX1Q9NSU2 369 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 PKD1L3Q7Z443 1732 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 A0A1B0GX78 115 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 OR10J4P0C629 311 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 GM2AP17900 193 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 GPX3P22352 226 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 OMGP23515 440 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 NFYBP25208 207 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PSMB5P28074 263 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC35A2P78381 396 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 MAT1AQ00266 395 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 GALEQ14376 348 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 OR8G1Q15617 311 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 DESI1Q6ICB0 168 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 DBX2Q6ZNG2 339 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 MED25Q71SY5 747 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 OVCH1Q7RTY7 1134 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 SCD5Q86SK9 330 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 CPNE4Q96A23 557 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 GAREM1Q9H706 876 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 C12orf49Q9H741 205 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 CXXC1Q9P0U4 656 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 MBLAC1A4D2B0 266 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 BLVRBP30043 206 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 RACK1P63244 317 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 SMAD2Q15796 467 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 GLYR1Q49A26 553 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 TRIM61Q5EBN2 209 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 DPY19L2P2Q6ZN68 376 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PIANPQ8IYJ0 282 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PLPP5Q8NEB5 264 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 OR51A2Q8NGJ7 313 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 ST7LQ8TDW4 575 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 NRIP3Q9NQ35 241 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 WDR88Q6ZMY6 472 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 KCNJ15Q99712 375 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 TAS2R16Q9NYV7 291 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PDCD11Q14690 1871 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 JAG1P78504 1218 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 ITGB8P26012 769 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PSMB3P49720 205 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 ADGRG3Q86Y34 549 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 APH1AQ96BI3 265 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PDLIM5Q96HC4 596 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 FN3KRPQ9HA64 309 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PUS1Q9Y606 427 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 DNAJC25-GNG10A0A024R161 153 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 TPOP07202 933 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 FOLR1P15328 257 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 ELK1P19419 428 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC6A11P48066 632 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 FOXA1P55317 472 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 HOXC5Q00444 222 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 HS3ST2Q9Y278 367 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 MRPS28Q9Y2Q9 187 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 NDUFB7P17568 137 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 HTR6P50406 440 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 GPR19Q15760 415 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC5A12Q1EHB4 618 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 CLEC14AQ86T13 490 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 KDF1Q8NAX2 398 aaPredicted RBP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 LHX3Q9UBR4 397 aa10.34□□□□□ -0.75
CCDC144B-208ENST00000618081 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms