RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 RNH1P13489 461 aaKnown RBP12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 POU3F4P49335 361 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RNLSQ5VYX0 342 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 FATE1Q969F0 183 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR51M1Q9H341 326 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 FBXO7Q9Y3I1 522 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CEP290O15078 2479 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC16A5O15375 505 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SOX15O60248 233 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NME2P1O60361 137 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF528Q3MIS6 628 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 DMRTC1Q5HYR2 192 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 C1orf189Q5VU69 101 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ACOT7LQ6ZUV0 252 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 KDM8Q8N371 416 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TIFAQ96CG3 184 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 THOC3Q96J01 351 aaKnown RBP12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 AMDHD1Q96NU7 426 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LAT2Q9GZY6 243 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 H3BNC9 293 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 IMPA2O14732 288 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 QDPRP09417 244 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CSF1P09603 554 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
TNFRSF11A-205ENST00000616710 F5P12259 2224 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MPTX1A8MV57 137 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 BCL2L11O43521 198 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PLPP2O43688 288 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF44P15621 663 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ACTC1P68032 377 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ACTA1P68133 377 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CDK5R1Q15078 307 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 BAP18Q8IXM2 172 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GPER1Q99527 375 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TMEM235A6NFC5 223 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RNGTTO60942 597 aaKnown RBP12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ELNP15502 786 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CHAF1BQ13112 559 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LCTLQ6UWM7 567 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC35D2Q76EJ3 337 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TMEFF1Q8IYR6 380 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR10G6Q8NH81 332 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PLD4Q96BZ4 506 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PHB2Q99623 299 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CGGBP1Q9UFW8 167 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LAMP5Q9UJQ1 280 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF646O15015 1829 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LRP3O75074 770 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PAPLNO95428 1278 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RHOP08100 348 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GLI4P10075 376 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR3A2P47893 321 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF124Q15973 351 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF561Q8N587 486 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SBF1O95248 1867 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TSPAN11A1L157 253 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CPED1A4D0V7 1026 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 METTL12A8MUP2 240 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TSTD3H0UI37 97 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MAN2B1O00754 1011 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 KNG1P01042 644 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 IFNA2P01563 188 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TLX1P31314 330 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR8D1Q8WZ84 308 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HAVCR1Q96D42 359 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SMIM19Q96E16 107 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CENPMQ9NSP4 180 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 FOXJ3Q9UPW0 622 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A0A0A6YYH2 397 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A0A1W2PPE2 198 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ANKRD20A5PA0PJZ0 165 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A6NJ64 397 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SOCS5O75159 536 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZFPL1O95159 310 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CPN1P15169 458 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC6A6P31641 620 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CASRP41180 1078 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 DHRS2Q13268 280 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SETD7Q8WTS6 366 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms