RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 IRX3P78415 501 aaPredicted RBP3.98□□□□□ -1.77
RFC3-203ENST00000616236 SIGLEC14Q08ET2 396 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 NCF4Q15080 339 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 ANGPT1Q15389 498 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 SF3A2Q15428 464 aaKnown RBP3.98□□□□□ -1.77
RFC3-203ENST00000616236 TSC22D1Q15714 1073 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 MARCH8Q5T0T0 291 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 ANKRD26P1Q6NSI1 321 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 TMUB2Q71RG4 321 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 SNX20Q7Z614 316 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 RBM45Q8IUH3 476 aaKnown RBP3.98□□□□□ -1.77
RFC3-203ENST00000616236 KLHDC8BQ8IXV7 354 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 FAM9CQ8IZT9 166 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 PRELID2Q8N945 189 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 CLHC1Q8NHS4 586 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 ZNF502Q8TBZ5 544 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.98□□□□□ -1.77
RFC3-203ENST00000616236 DUS3LQ96G46 650 aaKnown RBP3.98□□□□□ -1.77
RFC3-203ENST00000616236 ART5Q96L15 291 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 BBS2Q9BXC9 721 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 RAB1BQ9H0U4 201 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 NTN4Q9HB63 628 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 NRBP2Q9NSY0 501 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 HRASLS2Q9NWW9 162 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 ADAM22Q9P0K1 906 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 ABCD2Q9UBJ2 740 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 CTSZQ9UBR2 303 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 RSPH14Q9UHP6 348 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 CDH10Q9Y6N8 788 aa3.98□□□□□ -1.77
RFC3-203ENST00000616236 GON4LQ3T8J9 2241 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 IGHV1OR21-1A0A087WYE8 117 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 A0A0G2JRQ6 117 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 DHRS7CA6NNS2 312 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 A8MUA0 341 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CDC7O00311 574 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CDX4O14627 284 aaPredicted RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 E2F6O75461 281 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ETHE1O95571 254 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ACSM4P0C7M7 580 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 TBPP20226 339 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 TNFSF9P41273 254 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 SSR4P51571 173 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 PAX2Q02962 417 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ZNF33AQ06730 810 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 TRAM2Q15035 370 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 GABRA6Q16445 453 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 KLF17Q5JT82 389 aaPredicted RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 OR5M10Q6IEU7 315 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 C1orf94Q6P1W5 598 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 Q6ZN92 141 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 GDPD3Q7L5L3 318 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 COPS6Q7L5N1 327 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 BHLHA9Q7RTU4 235 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 LHFPL3Q86UP9 236 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ERO1BQ86YB8 467 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CD302Q8IX05 232 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 PUSL1Q8N0Z8 303 aaKnown RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 PDIK1LQ8N165 341 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CCDC26Q8TAB7 109 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CXorf40AQ8TE69 158 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ITLN1Q8WWA0 313 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 SMARCD2Q92925 531 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ISOC2Q96AB3 205 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 MCCC1Q96RQ3 725 aaPredicted RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 LLPHQ9BRT6 129 aaKnown RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 WACQ9BTA9 647 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 FGFBP2Q9BYJ0 223 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 NAA50Q9GZZ1 169 aaKnown RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 ZNF696Q9H7X3 374 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CSNK1G1Q9HCP0 422 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ACP6Q9NPH0 428 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 MIEF1Q9NQG6 463 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 ADA2Q9NZK5 511 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CCDC59Q9P031 241 aaKnown RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 CD300AQ9UGN4 299 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 MUTYHQ9UIF7 546 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 YARS2Q9Y2Z4 477 aaKnown RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 SAR1BQ9Y6B6 198 aa3.97□□□□□ -1.77
RFC3-203ENST00000616236 V9GYY5 206 aaPredicted RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 PHF3Q92576 2039 aaKnown RBP3.97□□□□□ -1.77
RFC3-203ENST00000616236 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 TRAV9-2A0A087WT02 112 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 USP27XA6NNY8 438 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 SLC9A3R1O14745 358 aaPredicted RBP3.96□□□□□ -1.78
RFC3-203ENST00000616236 GMDSO60547 372 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 SLC19A2O60779 497 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 CLDN11O75508 207 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 VENTXO95231 258 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 DCNP07585 359 aaKnown RBP3.96□□□□□ -1.78
RFC3-203ENST00000616236 SLC35E2P0CK97 266 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 IGLL1P15814 213 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 MAP3K7CLP57077 242 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 ATP6V0D1P61421 351 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 ACTA2P62736 377 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 ACTG2P63267 376 aa3.96□□□□□ -1.78
RFC3-203ENST00000616236 ACTC1P68032 377 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms