RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CIDEAO60543 219 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 PRF1P14222 555 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 LGALS7P47929 136 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 ZNF273Q14593 569 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 TMEM135Q86UB9 458 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 APCDD1Q8J025 514 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 ARFGAP1Q8N6T3 406 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 OR56B1Q8NGI3 324 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 OR5W2Q8NH69 310 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 FAM213BQ8TBF2 198 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 DHRS11Q6UWP2 260 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 CANT1Q8WVQ1 401 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 UTP4Q969X6 686 aaKnown RBP11.72□□□□□ -0.53
TCF4-248ENST00000616053 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 PNCKQ6P2M8 343 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 RPS19BP1Q86WX3 136 aaKnown RBP11.72□□□□□ -0.53
TCF4-248ENST00000616053 ARHGEF39Q8N4T4 335 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 FNDC8Q8TC99 324 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 ZNF334Q9HCZ1 680 aaPredicted RBP11.72□□□□□ -0.53
TCF4-248ENST00000616053 TOX4O94842 621 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 JAM2P57087 298 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 TPPP2P59282 170 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 TMEM239Q8WW34 195 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 STMND1H3BQB6 276 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 TXNDC12O95881 172 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 MMP15P51511 669 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 C21orf58P58505 322 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 CEACAM7Q14002 265 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 SIX1Q15475 284 aaPredicted RBP11.71□□□□□ -0.53
TCF4-248ENST00000616053 PPP1R3AQ16821 1122 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 ADGRG5Q8IZF4 528 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 DEFB124Q8NES8 71 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 OR4M1Q8NGD0 313 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 OR2AE1Q8NHA4 323 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 ELMOD3Q96FG2 381 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 TMEM19Q96HH6 336 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 TMPRSS5Q9H3S3 457 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 SNNO75324 88 aaPredicted RBP11.71□□□□□ -0.53
TCF4-248ENST00000616053 RNF224P0DH78 156 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 CRISP2P16562 243 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 DNAJB1P25685 340 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 ARR3P36575 388 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 TNK1Q13470 666 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 DHRS7BQ6IAN0 325 aaPredicted RBP11.71□□□□□ -0.53
TCF4-248ENST00000616053 CD300LGQ6UXG3 332 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 ZBTB8AQ96BR9 441 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 PPP1R3CQ9UQK1 317 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 SPO11Q9Y5K1 396 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 SCAMP2O15127 329 aaKnown RBP11.71□□□□□ -0.53
TCF4-248ENST00000616053 GABRA5P31644 462 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 OXA1LQ15070 435 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 ADIRFQ15847 76 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 ZNF385BQ569K4 471 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 XYLT2Q9H1B5 865 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 NID2Q14112 1375 aa11.71□□□□□ -0.53
TCF4-248ENST00000616053 UNCXA6NJT0 531 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 ZNF264O43296 627 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 CDC14BO60729 498 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 UBALD2Q8IYN6 164 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 CDS1Q92903 461 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 WRAP73Q9P2S5 460 aaPredicted RBP11.71□□□□□ -0.54
TCF4-248ENST00000616053 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 FPR2P25090 351 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 IQCJQ1A5X6 159 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 C19orf54Q5BKX5 351 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 MORN1Q5T089 497 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 KDM8Q8N371 416 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 BIRC7Q96CA5 298 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 FUNDC2Q9BWH2 189 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 TMEM165Q9HC07 324 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 HCFC1R1Q9NWW0 138 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 NCOA3Q9Y6Q9 1424 aa11.71□□□□□ -0.54
TCF4-248ENST00000616053 ZNF840PA6NDX5 716 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 RNF225M0QZC1 329 aaPredicted RBP11.7□□□□□ -0.54
TCF4-248ENST00000616053 NPPAP01160 153 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 ITGB7P26010 798 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 CLINT1Q14677 625 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 AGERQ15109 404 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 PGBD5Q8N414 524 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 ENDOVQ8N8Q3 282 aaKnown RBP11.7□□□□□ -0.54
TCF4-248ENST00000616053 GHITMQ9H3K2 345 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 BET1LQ9NYM9 111 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 DHCR7Q9UBM7 475 aaKnown RBP11.7□□□□□ -0.54
TCF4-248ENST00000616053 EBF1Q9UH73 591 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 ELLP55199 621 aaPredicted RBP11.7□□□□□ -0.54
TCF4-248ENST00000616053 TBCEQ15813 527 aaPredicted RBP11.7□□□□□ -0.54
TCF4-248ENST00000616053 ZNF551Q7Z340 670 aaPredicted RBP11.7□□□□□ -0.54
TCF4-248ENST00000616053 DPPA2Q7Z7J5 298 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 GPR32P1Q8NGA4 272 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 OR8J2Q8NGG1 315 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 RAB3CQ96E17 227 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 TRIB3Q96RU7 358 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 OR5V1Q9UGF6 321 aa11.7□□□□□ -0.54
TCF4-248ENST00000616053 EGFP01133 1207 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms