RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZNF761Q86XN6 746 aaPredicted RBP20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 RNF113BQ8IZP6 322 aaKnown RBP20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 OR5J2Q8NH18 312 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 SMPDL3BQ92485 455 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 TSNAXQ99598 290 aaKnown RBP20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 MCHR1Q99705 422 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 AIF1LQ9BQI0 150 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 XKR8Q9H6D3 395 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 C5AR2Q9P296 337 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 MBD2Q9UBB5 411 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 KLK11Q9UBX7 282 aa20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 GPR55Q9Y2T6 319 aaPredicted RBP20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 AK6Q9Y3D8 172 aaKnown RBP20.02■□□□□ 0.8
POLR2J3-220ENST00000613744 EP300Q09472 2414 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 ZFHX2Q9C0A1 2572 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 ZC3H12DA2A288 527 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 RTCAO00442 366 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 GPRIN2O60269 458 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 PIP5K1CO60331 668 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 RCBTB2O95199 551 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 SLC2A5P22732 501 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 STARP49675 285 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 ZNF345Q14585 488 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 OLIG3Q7RTU3 272 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 SPAG16Q8N0X2 631 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 HS6ST2Q96MM7 605 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 F2RL3Q96RI0 385 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 EDEM2Q9BV94 578 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 MED20Q9H944 212 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 IFITM5A6NNB3 132 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 PYCARD-AS1I3L0S3 204 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 LINC01387J3KSC0 135 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 CDC42EP2O14613 210 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 CDX4O14627 284 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 GDF9O60383 454 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 DCDP81605 110 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 IGSF11Q5DX21 431 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 RPL22L1Q6P5R6 122 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 KRT77Q7Z794 578 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 OR13C5Q8NGS8 318 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 CD180Q99467 661 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 PDCD10Q9BUL8 212 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 TAS2R8Q9NYW2 309 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 SLC35A3Q9Y2D2 325 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 ETV7Q9Y603 341 aa20.01■□□□□ 0.79
POLR2J3-220ENST00000613744 GOSR2O14653 212 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 TMPRSS11DO60235 418 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 NR0B1P51843 470 aaKnown RBP20■□□□□ 0.79
POLR2J3-220ENST00000613744 NHLH1Q02575 133 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 TGM3Q08188 693 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 TMEM69Q5SWH9 247 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 RPTNQ6XPR3 784 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 ASCL5Q7RTU5 278 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 VRK2Q86Y07 508 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 C12orf45Q8N5I9 185 aaPredicted RBP20■□□□□ 0.79
POLR2J3-220ENST00000613744 RELL2Q8NC24 303 aaPredicted RBP20■□□□□ 0.79
POLR2J3-220ENST00000613744 TMEM255BQ8WV15 326 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 ZFPM2Q8WW38 1151 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 HAVCR1Q96D42 359 aa20■□□□□ 0.79
POLR2J3-220ENST00000613744 ARID1BQ8NFD5 2236 aaPredicted RBP20■□□□□ 0.79
POLR2J3-220ENST00000613744 TMEM218A2RU14 115 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 THY1P04216 161 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 SMIM6P0DI80 62 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 NCBP2P52298 156 aaKnown RBP eCLIP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 STXBP1P61764 594 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 CSRP2Q16527 193 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 OR52E1Q8NGJ3 308 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 HCAR1Q9BXC0 346 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 ALX4Q9H161 411 aaPredicted RBP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 LHX9Q9NQ69 397 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 ERVK-19Q9WJR5 959 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 HEBP2Q9Y5Z4 205 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 COLEC10Q9Y6Z7 277 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 GOLGA4Q13439 2230 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 NUDT19A8MXV4 375 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 GNB5O14775 395 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 HMGN2P05204 90 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 GPR143P51810 404 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 RPS11P62280 158 aaKnown RBP eCLIP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 CBFBQ13951 182 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 LASP1Q14847 261 aaKnown RBP19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 NDUFAF6Q330K2 333 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 LIN54Q6MZP7 749 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 HMGN2P46Q86SG4 172 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 LDLRAD3Q86YD5 345 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 SKA3Q8IX90 412 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 KCNRGQ8N5I3 272 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 BBS4Q96RK4 519 aa19.99■□□□□ 0.79
POLR2J3-220ENST00000613744 NDUFS4O43181 175 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 FRS3O43559 492 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 OR2F2O95006 317 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 NTN1O95631 604 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 S100A8P05109 93 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 FOXK2Q01167 660 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 HHEXQ03014 270 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 OR2F1Q13607 317 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 C10orf91Q5T1B1 145 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 C17orf64Q86WR6 236 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 SLC35F3Q8IY50 421 aa19.98■□□□□ 0.79
POLR2J3-220ENST00000613744 ARL14Q8N4G2 192 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms