RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LGALSLQ3ZCW2 172 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 DMRTC1Q5HYR2 192 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 RAB12Q6IQ22 244 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 SLITRK4Q8IW52 837 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF595Q8IYB9 648 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 TMEM185AQ8NFB2 350 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 OR1N1Q8NGS0 311 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 SGPP1Q9BX95 441 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 KLHL13Q9P2N7 655 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 SLC6A5Q9Y345 797 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 PRELID3BQ9Y3B1 194 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 PCDHGB7Q9Y5F8 929 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 RNASET2O00584 256 aaKnown RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ARPC1BO15143 372 aaKnown RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ANXA2P07355 339 aaKnown RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 HOXD4P09016 255 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 GABRB1P18505 474 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 POU3F1Q03052 451 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 FAM74A1Q5RGS3 127 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 PMS2CLQ68D20 193 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 OR4F15Q8NGB8 312 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 C16orf52Q8NHV5 167 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 PELOQ9BRX2 385 aaKnown RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 OR11A1Q9GZK7 315 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 C12orf49Q9H741 205 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 IER3IP1Q9Y5U9 82 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 TRBV4-1A0A0J9YWV2 114 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 FOXE1O00358 373 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 DNAJB6O75190 326 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 WDPCPO95876 746 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 LALBAP00709 142 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 CD79AP11912 226 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 POU3F2P20265 443 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 SOX18P35713 384 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ETV5P41161 510 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 CRYBB2P43320 205 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 E2F1Q01094 437 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 DUSP2Q05923 314 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF273Q14593 569 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 STPG1Q5TH74 334 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 PYHIN1Q6K0P9 492 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 JAGN1Q8N5M9 183 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF283Q8N7M2 679 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 OR11H7Q8NGC8 314 aa9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF471Q9BX82 626 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 CHMP1AQ9HD42 196 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 ELF5Q9UKW6 265 aaPredicted RBP9.94□□□□□ -0.82
FAM3A-221ENST00000612856 LNP1A1A4G5 178 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 F5H5K5 113 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 DPP4P27487 766 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 B2MP61769 119 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 MAPK14Q16539 360 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 GPR139Q6DWJ6 353 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF585AQ6P3V2 769 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 OR6T1Q8NGN1 323 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 PITX2Q99697 317 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF559Q9BR84 538 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 TECTAO75443 2155 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 FARS2O95363 451 aaKnown RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SOD1P00441 154 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 PITPNBP48739 271 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 VEGFCP49767 419 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 ARFIP1P53367 373 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 MLLT11Q13015 90 aaPredicted RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SLC27A4Q6P1M0 643 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 LEG1Q6P5S2 330 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SERPINA11Q86U17 422 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SIAH3Q8IW03 269 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 CLRN3Q8NCR9 226 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 OR10Z1Q8NGY1 313 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 THAP6Q8TBB0 222 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 GPBAR1Q8TDU6 330 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 GCDHQ92947 438 aaPredicted RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 ZG16BQ96DA0 208 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 NXF2Q9GZY0 626 aaKnown RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 MED20Q9H944 212 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 CALHM2Q9HA72 323 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 UBQLN4Q9NRR5 601 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 LRFN1Q9P244 771 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 CCL27Q9Y4X3 112 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 ENPP4Q9Y6X5 453 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 KDM4EB2RXH2 506 aaPredicted RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SP9P0CG40 484 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 TACR3P29371 465 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 RPS27P42677 84 aaKnown RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 CYB561P49447 251 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 UBE2MP61081 183 aaKnown RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 FABP5Q01469 135 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 C4orf46Q504U0 113 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 STPG2Q8N412 459 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 CLDN22Q8N7P3 220 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SLC2A12Q8TD20 617 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 DUSP15Q9H1R2 295 aaPredicted RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SLC22A11Q9NSA0 550 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 PLCXD1Q9NUJ7 323 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 CNOT2Q9NZN8 540 aaKnown RBP9.93□□□□□ -0.82
FAM3A-221ENST00000612856 SCP2D1Q9UJQ7 156 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 FBXL3Q9UKT7 428 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms